Candidatus Pantoea carbekii: HHS_02720
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Entry
HHS_02720 CDS
T02865
Symbol
b4162
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hhs
Candidatus Pantoea carbekii
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhs03019
]
HHS_02720 (b4162)
03009 Ribosome biogenesis [BR:
hhs03009
]
HHS_02720 (b4162)
Messenger RNA biogenesis [BR:
hhs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HHS_02720 (b4162)
Ribosome biogenesis [BR:
hhs03009
]
Eukaryotic type
Pre-60S particles
RNases
HHS_02720 (b4162)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAO00242
UniProt:
U3U7A1
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All DBs
Position
378491..379039
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AA seq
182 aa
AA seq
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MKNQKKNNLIWIDLEMTGLNPEYARIIEIATLVTNSDLEILAEGPVLAVYQSQEQLTMMD
TWNIRVHTSSGLLDRVASSKYNIHRAEETTIKFLKQWVKEGTSPICGNSVGQDRRFLFKY
MPTLEAYFHYRYLDVSTLKELARLWKPQILKNLKKFNNHNALDDIRESLAELSYYRKNFL
QI
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcaaaaaaaaaacaatttaatttggatagatttagaaatgacgggtttaaat
ccagaatatgcccgaattattgaaattgctacattagtaactaattctgacctcgaaatt
cttgcagaaggcccagtccttgcagtatatcaatctcaagaacaactaaccatgatggat
acctggaatatacgcgttcatactagtagtggattattagatcgtgttgcatcaagcaag
tataatattcatagagcagaagaaacgactattaaatttttaaaacaatgggttaaagaa
ggaacctcaccaatttgtggaaatagtgtcggtcaagatcgccgattcttatttaaatat
atgcctacattagaagcttattttcactatcgttatctcgatgttagtactctcaaagaa
ttagcacgtttatggaaacctcaaattctaaaaaaccttaaaaaatttaataatcataac
gcattagatgatatacgtgaatcattagctgagttgtcttactatagaaagaatttttta
caaatttaa
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