KEGG   Candidatus Pantoea carbekii: HHS_07540Help
Entry
HHS_07540         CDS       T02865                                 

Gene name
sdhA
Definition
(GenBank) SdhA protein
  KO
K00239  succinate dehydrogenase / fumarate reductase, flavoprotein subunit [EC:1.3.5.1 1.3.5.4]
Organism
hhs  Candidatus Pantoea carbekii
Pathway
hhs00020  Citrate cycle (TCA cycle)
hhs00190  Oxidative phosphorylation
hhs00650  Butanoate metabolism
hhs01100  Metabolic pathways
hhs01110  Biosynthesis of secondary metabolites
hhs01120  Microbial metabolism in diverse environments
hhs01130  Biosynthesis of antibiotics
hhs01200  Carbon metabolism
Module
hhs_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hhs_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hhs_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:hhs00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    HHS_07540 (sdhA)
   00650 Butanoate metabolism
    HHS_07540 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    HHS_07540 (sdhA)
Enzymes [BR:hhs01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     HHS_07540 (sdhA)
    1.3.5.4  fumarate reductase (quinol)
     HHS_07540 (sdhA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C GIDA Pyr_redox_2 HI0933_like FAD_binding_3 DAO
Motif
Other DBs
NCBI-ProteinID: BAO00724
UniProt: U3U8M1
LinkDB All DBs
Position
complement(1051374..1053155)
Genome map
AA seq 593 aa AA seqDB search
MGYIMRFSIREFDAIVIGAGGAGMRAALQISQLGHNCALLSKVFPTRSHTVSAQGGITVA
LGNTHDDNWEWHMYDTVKGSDYIGDQHAIEYMCKTGPEAVLELEHMGMPFSRLQDGRVYQ
RSFGGQSKNFGGEQAARTAAVADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNVDHA
IVGCIAICIETSEIVYFKAKATILATGGAGRIYQSTTNAHINTGDGIGMALRAGVPLQDM
EMWQFHPTGIAGIGILITEGCRGEGGYLLNKYGERLMERYAPNAKDLASRDVVARSMMIE
IREGRGFDNAPWGPHIKLKLDHLGSQILESRLPGILELSRTFAHVDPLKEAIPVIPTCHY
MMGGIPTKITGQALRLNQKGEDEIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAA
GIHLMECIQEQGPLRNATLDEIDAAIKRFNHWQNNTTGEDPINVYKALQKCMQNNFSVFR
EGKSMKQGLEELQSIRKRLKLARLDDRSRDFNTQRIECFELDNLMETAYATAVSANFRTE
SRGAHSRFDYPERDDENWLCHSLYIPQTEIVINRKVNMSPKLRAAFPPKIRTY
NT seq 1782 nt NT seq  +upstreamnt  +downstreamnt
gtggggtatataatgagattctcaatcagagaatttgatgctatagtcattggagcaggt
ggtgcaggtatgcgtgccgctttgcagatttctcaattaggtcataattgtgcgttgtta
tctaaagtgtttccaactcgttcccatactgtatcggcacagggaggtattacagttgca
ttaggtaatacccatgatgataactgggaatggcatatgtacgatacagttaaaggttct
gattacattggtgatcagcatgcaattgaatatatgtgtaaaactggtcctgaagcagtg
ttagaattagaacatatgggcatgccgttttctcgtcttcaagatggacgagtgtatcag
cgttcttttggtggacaatctaaaaattttggcggtgagcaagcagcacgaactgcagca
gttgcagatcgtactggacatgccttattgcatacactctatcagcaaaacttaaaaaat
aaaactactattttttcagaatggtacgctttagatctagtaaaaaatgttgatcacgcc
attgtaggttgcattgctatttgtattgaaacaagtgagatagtctattttaaagcaaag
gctacgattttggcaacaggtggtgctggtcgtatttaccaatctactaccaatgcacat
atcaatactggtgatggtataggtatggcattacgtgcaggtgtacctttacaagatatg
gaaatgtggcagtttcatccaactggtattgcaggcattggtatacttataacggaaggt
tgtcgtggtgaaggaggttatctattaaacaaatatggtgaacgtttaatggaacgttat
gcccctaatgctaaagatttagcgagtcgtgatgtggtagcacgttcaatgatgatcgaa
attcgagaaggtcgtggttttgataatgctccatggggaccacatattaaattaaaactt
gatcatcttggctctcaaatattggaatctcgtttgccaggaattttagaactatctcgt
acatttgcccatgtcgatccccttaaagaagcaatccctgttattccaacttgtcattac
atgatgggaggtattccaactaaaattactggtcaagcattacgcctgaaccaaaaaggt
gaggacgaaataatacctggcttatttgcagtaggggaagtggcatgtgtatcagtacac
ggcgctaatcgtcttggtggtaattcactgttagatttagtagtatttggtcgtgcagct
ggtattcatttaatggaatgtattcaagaacaaggaccattgcgtaatgcaacattggat
gaaattgatgcggctataaaacgttttaaccattggcaaaataatactacgggtgaagat
ccaataaatgtttataaggcacttcagaaatgtatgcaaaacaatttttcagtttttcgt
gaaggcaaatcaatgaaacagggtttagaagaattacaatctattcgtaaacgattaaaa
ttggcgcggctcgacgaccgttcgcgcgattttaacactcaacgcattgaatgttttgaa
ttagataatttgatggaaaccgcatatgccacagctgtttcggctaactttcgtactgaa
agtcgaggtgcacatagccgttttgactatcctgaacgcgatgatgaaaattggctatgt
catagtctctatataccacaaactgaaattgtaataaatcgtaaagtaaacatgagtcca
aaattacgtgcggcttttccgccaaaaattcgtacttattaa

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