Herbaspirillum hiltneri: F506_20425
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Entry
F506_20425 CDS
T04039
Name
(GenBank) ATP-dependent DNA ligase
Organism
hht
Herbaspirillum hiltneri
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
Rbx_binding
ptaRNA1_toxin
Motif
Other DBs
NCBI-ProteinID:
AKZ64703
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Position
complement(4512233..4513912)
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AA seq
559 aa
AA seq
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MRDFAHLYAELDATTATSRKLEALQAYFRHADAADAAWAVYFLAGGKPRQAVPTKLLRHC
AMQYAQLDEWLFDECYQAVGDLAETIAHVLPPATRDDDLGLSLWMEQRVAPLRGADAETV
RAALFSYWDVLDWQGRFLLSKLIGGGFRVGVSKLLVTRALAVVAGVDAKTVAQRLVGWTD
RGTRPTAAGFAELIAPPSEADRQRRGGQPYPFFLAHPLLADPATLGDPGEWQIEWKYDGI
RAQLVHREGRSWLWSRGEELITDRFPELAQLPLPEGVVIDGEIVIRRGGGSDGNEGVIAP
FADLQKRIGRKTLSARLLADLPAALIAYDLLELDGQDLRGRPQQERRALLEKLAADVPGL
TLAPVIGPAEAADWSALATLRESARARGVEGMMLKAKSSHYGIGRTKNVGTWWKWKIDPY
SVDAVLIYAQSGHGRRASLYTDYTFAVWDAEDAAGERRLVPFAKAYSGLTDAEIARVDRI
IRSSTVEKFGPVRSVKPSMVFEIGFEGIAASPRHKAGIAVRFPRILRIRDDKPIAEADSL
STLQALLSEAEGHHAARTA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacttcgcccacctgtatgcggaactcgatgccaccaccgcgaccagccgcaag
ctcgaggcgctgcaggcttactttcgccatgccgacgccgccgatgcggcatgggcggtg
tatttcctggccggcggcaagccgcgccaggcggtgccgacaaagttgctgcgccactgc
gcgatgcaatatgcgcagctcgacgaatggctgttcgatgagtgttaccaggccgtcggc
gacctggccgaaaccatcgcccacgtcctgccgcccgccacgcgcgacgacgatctcgga
ctgagcctgtggatggagcagcgcgtggcacccttgcgcggcgccgatgccgaaaccgtc
cgcgcggcgctgttctcgtattgggacgtgctcgactggcagggccgtttcctgctcagc
aagctgatcggcggcggcttccgggtcggcgtctcgaaactgctggtcacgcgcgcgctg
gccgtggttgccggcgtcgacgccaagaccgtcgcgcagcgcctggtcggctggaccgac
cgcggcacgcggcccaccgcagccggcttcgccgagttgattgcaccgccgtccgaagcc
gatcgccagcgtcgcggcggccagccttatcccttcttcctggcgcatcccttgctggcc
gatcccgccacgctgggcgatcccggcgaatggcagatcgaatggaaatatgacggcatc
cgcgcacagctggtgcatcgtgaaggacgcagctggctgtggtcgcgcggcgaggaactg
atcaccgaccgctttccggaactggcgcagttgccgctgcccgagggcgtggtcatcgac
ggggagatcgtgatccggcgcggaggcggcagcgatggcaatgaaggtgtcattgcgccc
ttcgccgacctgcaaaagcgcatcggccgcaagacgctgtcggccagattgttggccgat
ctgccggcggcgctaatcgcctacgatctgctcgaactggacgggcaggacctgcgcggc
aggccgcagcaggagcgacgtgcactgctggaaaaactcgctgcagacgtccccggcctg
accctcgcccccgtgatcggccccgccgaagccgccgactggagcgcgctggcgaccctg
cgcgaaagcgctcgcgcacgcggcgtcgagggcatgatgctgaaggcgaaatcgtcgcac
tacggcatcggccgcaccaagaacgtcggcacctggtggaagtggaagatcgatccctac
tcggtcgacgccgtcctgatctatgcgcaaagcggccacggccggcgcgcttcgctgtac
accgactacacctttgccgtgtgggatgccgaagatgcggccggagagcgccggctggtg
cccttcgcgaaggcctattccggattgaccgatgccgagatcgcacgcgtcgaccgcatc
atccgcagcagcaccgtggaaaagttcggaccggtgcgcagcgtcaagccgagcatggtg
ttcgaaatcggctttgaaggcatcgccgcctcgccgcgccacaaggccggcatcgcggtg
cgcttcccgcgcatcctgcgtatccgcgacgacaaaccgatcgcggaggcggacagcctg
tcgaccttgcaagccttgctcagcgaagcggaaggacatcatgctgcgcgcacggcctga
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