Hathewaya histolytica: NCTC503_00982
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Entry
NCTC503_00982 CDS
T05971
Symbol
pcrA_2
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhw
Hathewaya histolytica
Pathway
hhw03420
Nucleotide excision repair
hhw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC503_00982 (pcrA_2)
03430 Mismatch repair
NCTC503_00982 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhw03400
]
NCTC503_00982 (pcrA_2)
Enzymes [BR:
hhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC503_00982 (pcrA_2)
DNA repair and recombination proteins [BR:
hhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC503_00982 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
NCTC503_00982 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
ResIII
AAA_30
AAA_14
DEAD
AAA_12
AAA_11
AAA_22
Pex14_N
PcrA_UvrD_tudor
nSTAND3
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
VTQ86781
UniProt:
A0A4U9R7Y9
LinkDB
All DBs
Position
1:1017556..1019565
Genome browser
AA seq
669 aa
AA seq
DB search
MHIVQELDKEQENAKTIEEKNVLIVAAPGSGKTTTIINRVAFLQKKGVSRDNIIVITFTK
AAASNMKEKYKKLTYNDNIPFFGTFHSLFYKILRRSGYKFDIIPNFEVINLMKEVLGKFY
DDVSEEKIREILNYISIFKSSNLNLFEFNIENYPMEIFKFAYEHYESYKESKNYYDFDDL
QIKALNLLLKNESLIKSYSRLFKYILIDEFQDCDMLQIEVLKLFEKMGSSIFAVGDEDQC
IYGFRGSRPDCMVNFSEHFPKGIKLYLCNNYRSPQNIVESSKSIIKNNLMRNHKNIVAKN
ESLGDIKVKLYKDEGEEAEGIGDHILKITCGEKYKFSHNAILYRTNLESRSIIDAFIRRG
IPFTLIDKEYNFYEHFICRDILSYLRLSLDPTDRESFARIINKPFRYISKDSIQKLKRYR
EKIDVFDILTSFEEIKEFQLKNLMKVRKDINYLNKISLGTAIDYVLYELDYHKYIEEYSK
KYKSKLNELEEIIKEFRESAIPFRNILSFLCHIEKVKNEIEKSKTKKEGVLLSTIHGVKG
MEFKNVFLININEEIIPHSNSMESKENIEEERRLFYVGVTRTMENLFIGTLRTIKGKGIK
PSRFLKEMDIEGKEIGNFEVGSKINHKVLGQGEVLNVNENIINILFNDGIERKLDFSVSY
YGGLIEKIE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
ttgcatatagtacaggaattagataaggaacaggaaaatgctaaaaccatagaagaaaaa
aatgtgctcattgttgcagcacctggttctgggaagactacaaccataataaatagggta
gcctttttacagaaaaaaggtgttagtagagataatattatagttattacctttactaaa
gcagcagctagtaacatgaaagagaagtataaaaaattgacctataatgataacataccc
ttttttggaacttttcatagccttttttataaaatattaagaagaagtggatataagttt
gatattatacctaactttgaagttataaatttaatgaaagaggttttaggaaaattttat
gatgatgtatcggaagaaaagataagagaaatactaaattatatatctatatttaaatca
tcaaatttaaacctatttgaatttaatatagaaaattatcctatggagatatttaaattt
gcctatgaacattatgaatcatataaagaaagtaaaaattattatgattttgacgatctt
caaataaaggctttaaatttgcttctaaaaaatgaaagcttgattaagtcttacagcagg
ttatttaaatacatattaatagatgagtttcaggattgtgatatgctacaaatagaagtt
ttaaagttatttgagaaaatgggctcctcaatttttgcagtaggggatgaagatcaatgt
atatatggttttagaggatcaagacctgattgtatggtgaatttttctgaacattttcca
aagggcattaagctatatttatgtaataattatagaagtcctcaaaacattgttgaaagt
tcaaagagtataataaaaaataatttaatgagaaatcataagaatatagtagctaaaaat
gagagtcttggagatataaaagtaaaactttataaagatgagggtgaagaggcagaaggt
attggagatcatatcttgaagataacttgtggggaaaaatataaattttctcataatgcc
attttatatagaacaaacttagagagcagaagtataatagatgcttttatacgaagagga
ataccttttaccctcatagataaggaatataatttttatgaacattttatatgtagggat
atattatcttatttaagactaagtctagatcctacagatagggaaagttttgcaaggatt
ataaataagccctttagatatataagtaaagattctattcaaaaacttaaaagatatagg
gaaaaaatagatgtttttgatattttgacttcttttgaagagataaaagaatttcaactc
aagaaccttatgaaagttagaaaggatataaactatttaaataaaatctccttaggcact
gcaatagattatgttttatatgaacttgattaccataagtatatagaagaatactctaaa
aagtataaaagcaaattaaatgaactagaggagattataaaggaatttagagagtcagct
attccttttagaaatattttaagttttttatgtcatatagaaaaagtgaagaatgagata
gaaaaaagcaaaacaaagaaagaaggggtgctcttaagtacaatacatggtgttaagggc
atggaatttaaaaacgtatttttaataaatataaatgaagaaataatcccacatagtaat
tctatggaatcaaaggaaaatatagaagaagaaagaagactgttttatgtgggagttact
cgtactatggaaaatttatttataggaacattaagaactattaaaggaaaaggaattaaa
ccatcaagatttttaaaggaaatggatattgaaggaaaggaaatcggcaatttcgaagtg
ggttctaaaattaatcacaaagttttaggacaaggggaagtgcttaacgtaaatgaaaac
attataaatattttatttaatgatggtatagaaagaaagttggatttctctgtaagttat
tatggtggacttatagaaaaaattgaataa
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