KEGG   Hathewaya histolytica: NCTC503_00982
Entry
NCTC503_00982     CDS       T05971                                 
Symbol
pcrA_2
Name
(GenBank) DNA/RNA helicase, superfamily I
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hhw  Hathewaya histolytica
Pathway
hhw03420  Nucleotide excision repair
hhw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hhw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCTC503_00982 (pcrA_2)
   03430 Mismatch repair
    NCTC503_00982 (pcrA_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhw03400]
    NCTC503_00982 (pcrA_2)
Enzymes [BR:hhw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NCTC503_00982 (pcrA_2)
DNA repair and recombination proteins [BR:hhw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCTC503_00982 (pcrA_2)
   MMR (mismatch excision repair)
    Other MMR factors
     NCTC503_00982 (pcrA_2)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 Viral_helicase1 UvrD_C_2 ResIII AAA_30 AAA_14 DEAD AAA_12 AAA_11 AAA_22 Pex14_N PcrA_UvrD_tudor nSTAND3 Zeta_toxin
Other DBs
NCBI-ProteinID: VTQ86781
UniProt: A0A4U9R7Y9
LinkDB
Position
1:1017556..1019565
AA seq 669 aa
MHIVQELDKEQENAKTIEEKNVLIVAAPGSGKTTTIINRVAFLQKKGVSRDNIIVITFTK
AAASNMKEKYKKLTYNDNIPFFGTFHSLFYKILRRSGYKFDIIPNFEVINLMKEVLGKFY
DDVSEEKIREILNYISIFKSSNLNLFEFNIENYPMEIFKFAYEHYESYKESKNYYDFDDL
QIKALNLLLKNESLIKSYSRLFKYILIDEFQDCDMLQIEVLKLFEKMGSSIFAVGDEDQC
IYGFRGSRPDCMVNFSEHFPKGIKLYLCNNYRSPQNIVESSKSIIKNNLMRNHKNIVAKN
ESLGDIKVKLYKDEGEEAEGIGDHILKITCGEKYKFSHNAILYRTNLESRSIIDAFIRRG
IPFTLIDKEYNFYEHFICRDILSYLRLSLDPTDRESFARIINKPFRYISKDSIQKLKRYR
EKIDVFDILTSFEEIKEFQLKNLMKVRKDINYLNKISLGTAIDYVLYELDYHKYIEEYSK
KYKSKLNELEEIIKEFRESAIPFRNILSFLCHIEKVKNEIEKSKTKKEGVLLSTIHGVKG
MEFKNVFLININEEIIPHSNSMESKENIEEERRLFYVGVTRTMENLFIGTLRTIKGKGIK
PSRFLKEMDIEGKEIGNFEVGSKINHKVLGQGEVLNVNENIINILFNDGIERKLDFSVSY
YGGLIEKIE
NT seq 2010 nt   +upstreamnt  +downstreamnt
ttgcatatagtacaggaattagataaggaacaggaaaatgctaaaaccatagaagaaaaa
aatgtgctcattgttgcagcacctggttctgggaagactacaaccataataaatagggta
gcctttttacagaaaaaaggtgttagtagagataatattatagttattacctttactaaa
gcagcagctagtaacatgaaagagaagtataaaaaattgacctataatgataacataccc
ttttttggaacttttcatagccttttttataaaatattaagaagaagtggatataagttt
gatattatacctaactttgaagttataaatttaatgaaagaggttttaggaaaattttat
gatgatgtatcggaagaaaagataagagaaatactaaattatatatctatatttaaatca
tcaaatttaaacctatttgaatttaatatagaaaattatcctatggagatatttaaattt
gcctatgaacattatgaatcatataaagaaagtaaaaattattatgattttgacgatctt
caaataaaggctttaaatttgcttctaaaaaatgaaagcttgattaagtcttacagcagg
ttatttaaatacatattaatagatgagtttcaggattgtgatatgctacaaatagaagtt
ttaaagttatttgagaaaatgggctcctcaatttttgcagtaggggatgaagatcaatgt
atatatggttttagaggatcaagacctgattgtatggtgaatttttctgaacattttcca
aagggcattaagctatatttatgtaataattatagaagtcctcaaaacattgttgaaagt
tcaaagagtataataaaaaataatttaatgagaaatcataagaatatagtagctaaaaat
gagagtcttggagatataaaagtaaaactttataaagatgagggtgaagaggcagaaggt
attggagatcatatcttgaagataacttgtggggaaaaatataaattttctcataatgcc
attttatatagaacaaacttagagagcagaagtataatagatgcttttatacgaagagga
ataccttttaccctcatagataaggaatataatttttatgaacattttatatgtagggat
atattatcttatttaagactaagtctagatcctacagatagggaaagttttgcaaggatt
ataaataagccctttagatatataagtaaagattctattcaaaaacttaaaagatatagg
gaaaaaatagatgtttttgatattttgacttcttttgaagagataaaagaatttcaactc
aagaaccttatgaaagttagaaaggatataaactatttaaataaaatctccttaggcact
gcaatagattatgttttatatgaacttgattaccataagtatatagaagaatactctaaa
aagtataaaagcaaattaaatgaactagaggagattataaaggaatttagagagtcagct
attccttttagaaatattttaagttttttatgtcatatagaaaaagtgaagaatgagata
gaaaaaagcaaaacaaagaaagaaggggtgctcttaagtacaatacatggtgttaagggc
atggaatttaaaaacgtatttttaataaatataaatgaagaaataatcccacatagtaat
tctatggaatcaaaggaaaatatagaagaagaaagaagactgttttatgtgggagttact
cgtactatggaaaatttatttataggaacattaagaactattaaaggaaaaggaattaaa
ccatcaagatttttaaaggaaatggatattgaaggaaaggaaatcggcaatttcgaagtg
ggttctaaaattaatcacaaagttttaggacaaggggaagtgcttaacgtaaatgaaaac
attataaatattttatttaatgatggtatagaaagaaagttggatttctctgtaagttat
tatggtggacttatagaaaaaattgaataa

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