Haemophilus influenzae F3031 (nontypeable): HIBPF_10780
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Entry
HIBPF_10780 CDS
T01395
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hif
Haemophilus influenzae F3031 (nontypeable)
Pathway
hif03420
Nucleotide excision repair
hif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HIBPF_10780
03430 Mismatch repair
HIBPF_10780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hif03400
]
HIBPF_10780
Enzymes [BR:
hif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HIBPF_10780
DNA repair and recombination proteins [BR:
hif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HIBPF_10780
MMR (mismatch excision repair)
Other MMR factors
HIBPF_10780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
RlmN_N
Motif
Other DBs
NCBI-ProteinID:
CBY81215
LinkDB
All DBs
Position
1023474..1025657
Genome browser
AA seq
727 aa
AA seq
DB search
MMDISELLDGLNDKQREAVAAPLGNHLVLAGAGSGKTRVLTHRIAWLIAVENISEGSIMA
VTFTNKAAAEMRHRIQSTLAKHAQHQLFGMWIGTFHSIAHRLLRAHHLDVGLPQDFQILD
SEDQLRLIKRLLKLHNFDEKAFPPKQACWYINNKKDEGLRPNDIEDFNDRQEREWIKIYQ
IYQDTCDRAGLVDFAELLIRVYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKI
LAGKTGKVMIVGDDDQSIYGWRGAQIENIQKFLKDFKAETILLEQNYRSTANILNSANEL
IANNSDRLGKNLWTEGEKGDPVGIYSAFNELDEAKFVASQIQDWVEHGGKLDDCAVLYRS
NSQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLRLINNRQDDAAFERVINTPTR
GIGDRTLDILRNLTRERQITLWQAVQVATQENMLAGRASTALLRFQELINSLQLDTAEMP
LFAQTDFVIKHSGLYEMYQQEKGEKGEVRIENLEELVTATREFIKPDNAEEMTELTAFLT
HASLEAGEEQASPHQSCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAQKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRLRGTVTRAMNL
AKVGSLSNTSAVENEWKMGQKVKHEKFGFGTVINVEGSENNTRLQIAFQAQGIKWLIAHL
AKLEKVR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatttctgaattacttgacggactcaacgataaacaacgcgaagccgtagca
gctcctcttggtaatcacttagtgctagctggtgcaggctcgggcaaaacgcgtgtattg
acgcaccgtattgcttggttaattgcggtcgaaaatatttctgaaggcagcattatggcg
gtgacgtttaccaataaagccgcagcagaaatgcgtcatcgtattcaatctacccttgcc
aaacacgcacaacatcaattatttggtatgtggattggcaccttccacagcattgcccat
cgtttattacgagctcatcatttagatgtgggcttgccacaagatttccaaattttagat
tcagaagatcaacttcgtttaattaaacgattattaaaattacataattttgatgaaaaa
gcttttccgcctaaacaggcttgttggtacatcaataacaaaaaagatgaaggcttgcga
ccaaatgatattgaagattttaatgatcgccaagaacgtgaatggattaaaatttatcag
atctatcaagacacttgcgatcgcgcagggttggtcgattttgctgaattattaattcgg
gtctatgaattatttgagaaaaaaccattaattttgcaacgttatcaacaacgttttcag
catattttggtggatgaatttcaagacaccaataaaattcaatataagtggattaaaatt
cttgctggaaaaacaggcaaagtcatgattgtgggcgatgatgatcaatctatatacggt
tggcgtggtgcgcaaattgaaaatatccaaaaattcttgaaagatttcaaagccgagaca
attctccttgaacaaaactatcgttctaccgccaatatcctaaacagcgcaaatgaatta
attgcaaacaatagtgatcgtcttggtaaaaatttatggacagagggtgaaaaaggcgat
cctgtgggcatctattctgcctttaatgaattagatgaagcaaaatttgttgcttcacaa
attcaggattgggtagaacatggcggaaaacttgatgattgcgctgtactttatcgtagt
aatagccaatcacgggttattgaagaagctttaattcgttgtcaaattccataccgtatt
tatggcggtatgcgtttcttcgaacgtcaagaaattaaagatgcgttagcctatcttcgt
ttgattaataatcgtcaagacgatgcggcttttgagcgtgtaattaatacgccaacccgt
ggcattggcgaccgcactttagatatattgcgtaacttaacacgtgaacgccaaattacc
ttatggcaagcagtacaagtcgcaacacaagaaaatatgttggcagggcgagcctcaaca
gccttattacgtttccaagaattaattaattcactacaacttgataccgcagaaatgccg
cttttcgcacaaactgattttgtgattaaacattcgggcttatatgaaatgtatcaacaa
gaaaaaggcgaaaaaggcgaagtgcgtattgaaaacttggaagaattagttaccgcaacc
cgtgaatttatcaaacctgataatgcggaagaaatgaccgaactcactgcctttttaacg
cacgcttccttagaagctggcgaagaacaagcctcgccgcatcaatcttgtgtagaaatg
atgacgttgcactctgcgaaaggcttagaatttcctcgtgtatttatggtgggcgtagaa
gaaggattattcccaagttttcgttcttttgaagaacccggacgtttagaagaagagcgt
cgtttagcttatgtcggtattactcgcgcgcagaaaaaactgaccatctcttatgcggaa
agccgtcgattatatgccaaagaagaacgccatttaccatcacgctttatagcggaatta
ccgagagaatgtatccaagaaattcgtttacgaggaactgtcacgcgtgcgatgaatcta
gccaaagtcggttcattgtctaataccagtgcggtcgaaaatgaatggaaaatgggtcaa
aaagttaaacacgaaaaatttggtttcggcacagtgattaatgtggaaggatctgaaaat
aacacacgtttacaaatagcattccaagcgcaaggcattaaatggttgattgcgcatttg
gcaaaattggaaaaagtgcggtag
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