Haemophilus influenzae F3047 (nontypeable): HICON_06680
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Entry
HICON_06680 CDS
T01400
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hil
Haemophilus influenzae F3047 (nontypeable)
Pathway
hil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HICON_06680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hil03019
]
HICON_06680
03400 DNA repair and recombination proteins [BR:
hil03400
]
HICON_06680
Enzymes [BR:
hil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HICON_06680
Messenger RNA biogenesis [BR:
hil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HICON_06680
DNA repair and recombination proteins [BR:
hil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HICON_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HEM4
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
CBY86131
LinkDB
All DBs
Position
complement(417009..418868)
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AA seq
619 aa
AA seq
DB search
MLDSPLPSKIIEKPTALSVLKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCY
QIPALCFDGLTLVISPLISLMKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQLK
LLYVSPEKVMTNSFFQLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPI
MALTATADYATQQDILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGK
SGIIYCNSRNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFG
MGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILFEKPE
TPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQTPCNNCDICLDPPKKYDGLVDAQ
KVMSTIYRVGQCFGAHYVIAMLRGMHNQKIIERQHHKLSVYGIGKDKSKEHWQSVIRQLI
HLGFVQQVISELNPTLQLTESAKVILKGEEPLELAMPRISAISKIAHNPQRQGVANYDKD
LFARLRFLRKQIADKENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQP
FMALIQEHKAILANAQNND
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgctggattctcctttaccatcaaaaataatagaaaaaccgaccgcactttctgttttg
aaatcggtttttggttatcaatctttccgtaaagggcaggaagaagttattaatgctgct
ttaaatggacaagatgcgttggtggtaatggcaacggggaatggcaaatcgctttgttac
caaattcccgcactttgttttgatggtttaactttagtgatttctccgctgatttccttg
atgaaagatcaagtggatcagctgcaagctaatggaattgaggcggattttcttaattct
agtcagactttagaacagcagcaacaagtacaaaataagcttatttctgggcaacttaaa
ctactttatgtgtcgccagaaaaagtgatgacgaacagtttctttcaacttatttcttat
agcaaagtctgctttattgcgattgatgaagcacattgtatttctcaatgggggcatgac
tttcgccctgaatatacccagcttggcggtttaaaagccagtttccctgatgcgccgatt
atggcacttacggcaacggcagattatgcgactcaacaagatattctgcggcatcttaat
ctgaaaaatctgcacaaatacattggtagttttgatcgaccaaatattcgttataccttg
gaagaaaaatacaaacctatggagcaactgacacgttttgtgttggctcaaaagggtaag
agtgggattatttattgcaacagcagaaataaggttgagcgaattgcggaaagtttacgc
aataaaggtgtctctgctgctgcttaccatgcgggaatggaaacggcaattcgtgaacgt
gtgcaacaggattttcagcgtgataatgttcaagtagtagtcgcaaccattgcttttgga
atggggattaataaatccaatgtgcgctttgttgcccattttgatttaccacgtagcatt
gaatcttactatcaagaaacaggtcgagcaggacgcgatgatttacccgcagaggcggtt
ttgttttatgaaccagctgattatgcttggttacaaaaaattctcttcgaaaaaccagaa
acgccacagcgtcagattgagcaacataaattagaagctattggggaatttgcggaaagc
cagacttgtcgtcgtttagttcttctcaattattttggtgagcatcgacaaacaccatgc
aataactgtgatatttgccttgatcctcctaaaaaatatgatggtttagtcgatgcgcaa
aaagtaatgtctactatttatcgagtgggacaatgttttggtgcacattatgtgattgcg
atgttgcgtggcatgcacaatcagaaaattattgaacgccaacaccataaactttcagta
tatggcattggaaaagataaaagcaaagagcattggcagtctgttattcgtcaacttatt
catttgggttttgtgcaacaggttattagtgaattaaatccaacgttgcaacttactgaa
agtgcgaaagtgattttgaaaggcgaagaaccgttagaattggcaatgcctcgtatttct
gcaatcagtaagattgcccataatccacaacgtcaaggtgttgcaaattacgataaggat
ttatttgcacgcttgcgtttcttacgcaaacaaattgccgataaagaaaatattccgccg
tacattgtctttaatgatgcgactttgcaagaaatggcacaatatatgccaacaagcaat
attgaaatgttgcaaattaatggcgtgggctctatcaaattagagcggtttgggcagccg
tttatggcattgattcaagaacataaggcaattttggcgaatgcgcaaaataatgactaa
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