Heterobasidion irregulare: HETIRDRAFT_413081
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Entry
HETIRDRAFT_413081 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
3.6.4.13
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_413081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_413081
Spliceosome [BR:
hir03041
]
Complex C
Other components
Step II factors
HETIRDRAFT_413081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
DEAD
AAA_22
AAA_19
AAA_30
nSTAND3
T2SSE
FEZ
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-GeneID:
20673089
NCBI-ProteinID:
XP_009540688
JGI:
Hetan2_413081
UniProt:
W4KMT5
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MAEDDLYNLEFLSLVSKITQEIDNHIGLNDKTLAEFVIELHDHSKTQVEFKQKLKDAGAD
FPESFIENMDRLILTLHPKHKKKSAKSNGKAKANGDVELSEQDKQKRLFPGLALADQTWQ
PAFTKDDLMKEVDNMMSQFETTAKRPRSPPRRDEPSPKRRRHSPSPPSRRSPSPPRGRGN
DRRDDRRGRNGRERKVLDEKPVLYKIYDGKVSGLKDFGAFVQLEGLAARAEGLVHISSIQ
TGARANSASDLLTRGQQVKVKVMSVAGNRIGLSIKDVDQKTGRDLTPHLRIKSEAELIEE
ERQRASLASSGANAVPLNMKDEPVRSAKRLTSPERWEIKQLISSGIVDASEYPELDEDFT
NPVMRAEVEEELDVEVREDEPSFLRGQTKRTLDLSPVKIVKAPDGSLNRAAVAGASLAKE
RRELRQQEANEQADSEARDFSAPWLDPMAKEADRVFAQDLRSNLRDQKAADGQGWKASAF
NKSTTFGEITSLSIQDQRKSLPIYKLRDPLLQAIRDHPVLIVVGDTGSGKTTQMTQYLAE
DGFADRGKIGCTQPRRVAAMSVAKRVAEEVGCRLGQEVGYTIRFEDCTGPETRIKYMTDG
MLQRECLIDPDVSQYSVIMLDEAHERTISTDVLFGLLKKAIKRRPDLKLIVTSATLDAEK
FSKYFFGCPIFTIPGRTYPVEILYTKEPETDYLDASLITIMQIHLAEPPGDVLLFLTGQE
EIDTACEILYERMKALGPKVPELLILPIYSALPSEVQSRVFEPTPPGARKVVIATNVAET
SLTIPGIYYVVDPGFSKQNAYDPRLGMDSLVVMPISQAQARQRSGRAGRTGPGKCYRLYT
EAAYRNEMMPNSIPDIQRTNLAHTILMLKAMGVNDLLSFDFMDPPPAQTMLTALESLYAL
SALDDEGLLTRLGRKMADFPMEPPQAKMLIASVELGCSEEILSIVAMLSVQSVFYRPKEK
QGQADSKKAKFHQPEGDHLTLLAVYNGWKASNFSNPWCYENFIQARSMRRAQDVRKQLLG
IMDRYKHDILSAGKDYNRVRRAICSGFFRNAAKKDPQEGYKTLVEGTPVYIHPSSALFNR
NPEWCIYHELILTTREYCHNVMAIEPKWLVEVAPQFFKVADVNKISKRKRQEKIEPLFNK
YEKPDEWRLSKVKRSARSSQTFG
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagacgacctctataacctcgaatttctctctcttgtctccaaaatcacacag
gaaatcgacaaccatatcggactcaacgacaagacccttgccgagttcgtcatagagcta
cacgaccactccaaaactcaagtcgaattcaaacaaaagctcaaggatgcgggggccgat
ttccccgagtcgttcatcgagaacatggaccgtctcatcctcacgctccatcccaagcac
aagaaaaagtcggccaaatccaatggcaaggcgaaggccaacggagatgtggagctgtca
gagcaggacaagcagaagcgtctctttcctggccttgctctcgcagatcaaacgtggcaa
cccgcgttcacgaaggatgatttaatgaaggaggttgacaatatgatgtctcagtttgag
actacagcgaagagaccacgatcacccccacgccgcgacgaaccatcaccgaaacgtcgt
cgccattctccgtcaccgccttcccgtcgcagtccaagtcctccgagagggcgagggaac
gatcgaagagatgatagaaggggcaggaatggtcgggagaggaaggtattggacgagaag
ccggtgttatacaagatatatgacggcaaagtttcaggcttgaaagattttggagcgttc
gttcagctcgaaggcctagctgcaagggcagaaggcttggtgcatatctccagtatacaa
accggagctagagcgaattcagcttccgatcttctcacccgtggccagcaagtcaaggtc
aaagtcatgagtgtcgctggtaatcggataggactctccataaaggacgtggatcaaaag
actggacgcgatttaacaccacaccttcgaatcaaatccgaggccgaacttatcgaagag
gagcgtcaacgtgccagtctcgcgtcatccggtgcgaatgccgtcccgttgaacatgaaa
gatgagcctgttcggtctgctaaacgcctgacctctccggagcgctgggagataaagcaa
ctcatctcgtccggtatcgtcgacgcatcagaatatccagagctcgacgaggacttcacc
aatcctgtcatgcgtgcagaagtcgaggaagaattggatgttgaggtcagagaagacgag
ccttccttcttgcgcggtcagaccaagcggacgcttgatcttagccctgtcaagattgtc
aaagcacctgatgggtcactcaatcgagcagcagtcgctggagcctcacttgccaaagag
cgccgcgagctacggcagcaagaggcgaacgaacaggctgactcggaagcacgagatttc
agtgctccttggctagaccctatggcgaaggaggcggacagagtgtttgcgcaggacctg
cggagcaatttgagagaccaaaaggctgcagatggccaaggatggaaggcctcggcattc
aataaatccacaacatttggagagatcacctccttgagtatccaggaccagaggaaatca
cttccaatttacaagttgcgtgaccctctcctgcaggcaattcgagaccatccggtattg
atcgttgtcggcgacactggatccgggaagaccacccaaatgacgcaataccttgcggaa
gacggttttgccgatcggggcaagattggatgtacacaacctcgtcgtgtggcagctatg
tccgtcgcgaagcgtgtcgcagaagaggttggctgtcgcctcggccaagaggttgggtat
accatccgttttgaggactgcaccggtcctgaaactcggatcaagtacatgacggatggt
atgttgcagcgtgagtgcttgatagatccggacgtcagtcaatattctgtcatcatgttg
gatgaagcccacgagcggactatctctactgatgtcctattcggcttgctgaagaaggct
atcaagcgccgacccgacctgaaactcatcgttacttctgcgactcttgatgccgagaag
ttctcgaagtacttcttcggttgccccatcttcactatccctggtcgaacatatcctgtc
gaaattctctacacgaaagagcccgagacggattatcttgacgcttcgcttatcaccatc
atgcaaatccacttggccgaacctcctggcgatgttttactttttctgacaggtcaagag
gaaatcgacacggcttgcgagattctctacgaacgaatgaaggcgctagggcctaaagtg
cccgaactcctcattcttcctatctactccgcccttccgtcagaggtccagtcccgagtt
ttcgagcccacgccgcctggagcacgtaaggtggttatcgcaaccaacgtggccgagacg
agtttgacaattccgggcatctactacgtcgttgatcctggattctccaagcagaacgcg
tacgacccgagactcggtatggattcgctcgtcgtcatgcccatctcgcaggctcaggca
cgtcagcgatctggacgtgctggacgcacgggcccggggaagtgctatcgtctatacacc
gaggccgcgtaccggaacgagatgatgcccaactccatcccagatatccagcggacaaac
ttggcgcacacgatattgatgctgaaggccatgggcgtcaatgacctgctgagcttcgac
tttatggaccctccaccggcgcagaccatgttgaccgctcttgaatcgttgtatgcgctc
tcggcgctcgatgacgagggacttctcacgcgtcttgggcgcaaaatggccgacttcccg
atggagccgccacaggccaagatgctgatcgcgtccgtcgaacttggatgttcggaggaa
atcttgtctattgtggccatgctctctgtgcagagcgtgttttatagaccgaaggagaag
caagggcaggcagattcaaagaaggcgaagttccatcaaccggagggggaccatctgacg
ctgctggcggtctataacgggtggaaggcgagcaatttctcgaacccgtggtgttacgag
aactttatacaggcgaggagcatgcggagagctcaggatgtcaggaaacagttgttgggt
atcatggaccgatacaagcacgacatactgtctgctggaaaggattacaaccgcgtccgc
cgcgccatctgctcagggttcttccgaaacgcggcaaagaaggacccgcaagagggatac
aaaacgctcgttgaaggcacccccgtctacatccatccctcatcagcgttgttcaaccga
aatccagagtggtgcatataccacgagttgattctcacgacgcgcgagtactgtcacaac
gtgatggcgatcgagcccaagtggctcgtcgaggtggcgccccagttcttcaaagtggcc
gatgtcaataagattagtaaacgcaagaggcaggagaagatcgagcctctcttcaacaag
tacgagaaaccggacgagtggcggttgtcaaaggtcaaacggagtgcgaggtcgagtcag
acgttcggttga
DBGET
integrated database retrieval system
