Heterobasidion irregulare: HETIRDRAFT_444950
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Entry
HETIRDRAFT_444950 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
hir
Heterobasidion irregulare
Pathway
hir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HETIRDRAFT_444950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_444950
Enzymes [BR:
hir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HETIRDRAFT_444950
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
HETIRDRAFT_444950
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
HETIRDRAFT_444950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
HHH_8
DNA_pol_B_palm
DNA_pol_lambd_f
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
20675604
NCBI-ProteinID:
XP_009546458
JGI:
Hetan2_444950
UniProt:
W4K941
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MLARTLARRRLFPAAVPARALSTPAPGPNDAIVRLLSQHLDDENASPSRNPYKVRSFQTA
INAVRRAQHPILTGQEAAKLKGIGPRIAQRIEFFLNGKDYGKSSHSILASPLTQDPTARH
SARTAAELADAGCTSIEDLHRREYYLDILSKTQRAKLDHADHLRQEVTREEAENVADFIR
HHIASQFELHLMGDYRRDRPTAPKIELLLLHPSYVHVPVPPAPPAVHFPKTTRGNRPQPF
RPKHRAAPAGTAPLLAHVVRPLRDAGLLATPLHAYPSRWQGIALLPARASAGAGGDREAR
RWAEVGERLRDIRARRGSYRPIELSLAPVKSRGAAVLALTGDAEFVAALRIAATKLGMYL
NEYGLWRWHPNRRTQGPRDGAGVDVDVESELTSEEESTKEESAEESAKEEGESGYWELIQ
AESEAAIFEELGMPWVPPEKRNFGFLKETRPSARRGRPRKTPPALL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcccgcacgctcgctcgccgtcgcctcttccccgccgccgtccccgcacgtgcc
ctctccacccccgcaccgggccccaacgacgccatcgtccggctgctgtcccagcacctc
gacgacgagaacgcgagcccgtcccgcaacccctacaaggtccgctccttccagaccgcc
atcaacgccgtcaggcgcgcacagcaccccatcctcaccggccaggaggcagccaagctc
aagggcatcggcccgcgcatcgcccagcgcatcgagttcttcctgaacggtaaagactat
ggcaagtcctcgcattccatcctcgcatctcccctcactcaagaccccaccgcacgccac
agcgcccgcaccgccgcggagctcgccgacgccggctgcacctccatcgaagacctgcac
cggcgggagtactacctcgacatactctccaaaacccagcgcgccaagctcgaccacgcc
gaccacctccgccaggaggtcacgagagaggaggccgagaacgtcgccgacttcatccgc
caccacatcgcctcccagttcgagctccacctcatgggcgactaccgccgcgaccgcccc
acagcccccaagatcgagctcctcctcctccacccctcctacgtccacgtccccgtcccc
cccgccccgcccgccgtccacttcccaaaaacaacgcgcggaaaccgcccgcagcccttc
cgcccaaaacaccgcgccgcccccgccggcaccgccccgctcctcgcgcacgtcgtccgc
ccgctccgcgacgcgggcctcctcgccacaccgctccacgcgtacccatccaggtggcag
ggcatcgcgctgctccccgcgcgcgcgtcggcgggcgcgggcggcgaccgcgaggcgcgc
cgctgggcggaggtcggcgagcgcctgcgcgacatccgcgcgcgccgcgggagctaccgg
cccatcgagctcagcctcgcgccggtcaagtcgcgcggcgcggcggtgctcgcgctcacc
ggggacgcggagtttgtggccgcgctgcgcatcgcggcgacgaagctggggatgtacctg
aacgagtacgggctgtggcggtggcacccgaaccgccgcacgcagggcccgcgcgacggc
gccggcgtggacgtggacgtcgagtcggagctcacgagcgaggaggagtctacgaaggag
gagtcggcggaggagtctgcgaaggaggagggggagagcgggtactgggagctgatacag
gcggagagcgaggcggcgatcttcgaggagctgggcatgccctgggtgccgccggaaaag
cgcaactttgggttcctcaaggagacgcggccgagcgcgcgcaggggccgaccgaggaag
acgccgccggcgctgctctga
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integrated database retrieval system
