Heterobasidion irregulare: HETIRDRAFT_460814
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Entry
HETIRDRAFT_460814 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K23719
nuclear mRNA export protein SAC3
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_460814
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
HETIRDRAFT_460814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAC3_GANP
MLTR_LBD
Motif
Other DBs
NCBI-GeneID:
20677114
NCBI-ProteinID:
XP_009551435
JGI:
Hetan2_460814
UniProt:
W4JTW8
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MPTVLQEDDGMDTEGEGEEYTEGEGEIEEPELSTPEERERFYQELVKAREVERKKAIAEG
KMDDPLVPKRLDEAITMVGTCMDMCPRFERYRRERENNLFEWEVIPGTRRVDHNRAVKMY
ERAAGDKTLPSDLRPPPVLKRTLNYLFHNLMPREGFSPTFNFIRDRSRSVRNDFTMQHET
GAVAMECHERCARFHILALHIERSRSGFSIALEEQQLMNTLQSLKEFYEDQRGRHQSPNE
LEMRIYHRLIHIRDQRERHDDIPQSILSHPVFLLTTKFRKHIQAKSEPITKTSALVVDEE
GMAIFAELAGVLQQQGSQVMVYLVACILERLFGTDTIDDIESIRAGLDLPQVIDGEMSST
DKVNHQLNPPRARSPVKPSATEWLTDNFGPKPASSIFRQTSSDPASAFSSIPTSTSAPAA
APVYTTEAPAPAATAFSNLKTTPNVFGGATFTTGTSAFGSSKPSNLSPFAGLGDTNNSAY
GTNSSASASPFGGSTVPATSAFGGASAAFPSSTSAPSVLAPSFGQTAFGSTSAFAGIASS
SKASPFGDASVSTQSHVAPSSISSSVSQPSFGVSGFGQTTAFNSKPAPLPASSSTSSGFF
STPPTSAFTPSSVSVPTPLEKEPAPAFGSTSLNPTAPVFLPGKRESLVATSPPIPITAAL
TPTPPSVASHHSRPSLPPINTSPSSSFSPTPQPQSQSKSVPEANKSLATPPVGQSNILER
KQTLFEWPNTTTNNSVNGSESISRMPTLVVPLTPSGRSPPTQPPPLKMNPISLPGTPTTT
SFQSSAKPMKSLFGYPSLQSMSSVSSEDILSPLQLSAQSSFTGLKRPSTVESPTPAGSSA
VSNHSSLAPTPTPTPTPARVPVPSFITTSQSSTSTPAPLATSSPTLAPTLSKVNGKGKGR
AIDSAILEGKAVDFLRRSLVVKSSFQQWRHDTTERLKWVDAVRRSDAYSERVHRQSLSNG
KSPSKKRRESNGIVVEAPTAKRVRKRMSSKYVPPRTDDQLAQRLKEVLRLSQQNHDQHER
RWAVGTFLELIRQHIHNVAKSYPFDWSVWLSTNSDNDGTAIWVERKFNVPESGRWATERI
FSIPLKPGDESAESPGLIVFECSPLEGIEDEIERKYRILDDCSRLREVVEALPEDRHFVP
SILFINWGEGEQASVSHDILAMVEDFVVKGDLNSHCTFSLTSTTIDLDTRLLESLRPMPL
DVSGRLIEILSWNGLLKLVISPWREFAEDWVTRCAADNEVDWHLYSQVLRTLIELMNILS
RHVISRFDNVESYTDPLPLLGNDTIQDSQAMYEVAFAWLDQPDFPVNSFIDHIYELALRR
TESVVQPDKSTNYPIPKREIQAIREDTEKSILKSGDKLRRTFAFFVRRKRRAPDDEADIL
SSSTSSKKARTLSSEPTIVDDALFTSHTNGSRMSNGSMHPPPPSPTASATTSMTTDTDGS
LPRVTTAMLRALTKSVFNNRGEARS
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgtgttgcaggaagatgacggtatggacactgaaggcgagggtgaggagtac
actgagggtgaaggcgagatcgaagagccagagctgagcaccccggaggagcgcgagcga
ttttatcaagagctcgtgaaagcgcgagaagtagaacgaaagaaagcaatagcagaggga
aagatggacgatcctctggttccaaaacggttggacgaagccatcacgatggtcgggaca
tgcatggacatgtgtccacggttcgagaggtacaggcgcgaacgggaaaataacctgttt
gagtgggaagttatccccgggacgagacgggtagatcacaatcgcgccgtgaagatgtac
gagcgcgcggctggcgacaagacactaccgtccgatttgcggccgcctcccgttctcaag
agaacattgaactatctattccataaccttatgcctcgggaaggattctctccaaccttt
aatttcattcgtgatcgttctcgttctgttcgaaacgatttcacgatgcaacatgagaca
ggtgctgttgctatggagtgccacgaacgttgcgcacgatttcatattctcgcgctccat
atcgagcgaagccgcagtgggttctcgattgcattagaagagcagcagctcatgaacact
cttcaaagcttgaaggagttctacgaggaccaacgcggtcgccaccagtcgccgaacgaa
ctagaaatgaggatctaccaccgtctcatccacatacgcgatcaacgagagcgacatgac
gatatccctcaatcaatcctgtctcaccctgtctttcttctgaccacaaaattccggaag
cacatccaggcgaaatcggagcctataacgaaaacctctgctttggtggttgacgaagag
gggatggcgattttcgccgaattggcaggggtacttcaacagcaagggagccaggtcatg
gtctaccttgtagcctgcattcttgagcggctgttcgggacggacacgattgatgatatc
gaaagcattcgtgctggactggatcttcctcaagtcatagacggggagatgtcgtcgact
gacaaagtgaaccatcagctgaatccaccacgagctagatctcctgtgaagccgagtgcg
acagagtggctcaccgacaatttcgggccgaagcctgcgtcgtctatcttcagacaaacg
tctagcgaccctgcctctgcattttcctccattccaacctctacgtctgcgccagctgca
gcgccggtttataccacggaggctccagctcctgctgcgactgcgttttctaacctgaag
acgacaccaaacgtgttcggtggggcaaccttcacaacgggtacctctgcttttggtagc
tcaaagccttccaatctatcgccattcgctggcctcggggatacaaacaactccgcatat
gggaccaacagctcagcctctgcatcgccttttggagggtccaccgtccccgcgacgagt
gcgtttggtggcgcatccgcagcctttccctcgtctacgtcggcgcccagtgtcctcgcc
ccatccttcggacagaccgcttttggctcgacatcggcattcgcgggtatcgcgtcctcc
tccaaggcatcgccctttggtgacgcatcagtatcgactcagtcacacgttgccccttcg
tcaatctcatcaagcgtgtcgcaaccctcgtttggagtctccgggtttggccaaacgact
gccttcaattcgaagccggcaccgttacctgctagttcttcgacaagttcgggcttcttc
agcacgccgccaacctcagcatttaccccatcctctgtctctgtaccgacgccacttgaa
aaggaaccggcacctgcgtttggttcaacatcgctgaaccctaccgctcccgtctttctg
ccgggaaagcgtgaatccctcgtagctacatcaccacctatacctatcacagctgcactc
acacctacaccaccatctgtagcttctcaccactcacgaccttcacttcctcctatcaat
acatccccctcctcctctttctcacctactccacaaccccagtcgcaatcaaagagtgta
ccagaagctaacaaatctttggccactcccccggtcgggcaatcaaatatacttgagagg
aaacaaaccctcttcgaatggcctaacacaactactaacaattctgtcaatggatctgag
agtatttctcgcatgccaacgctcgtggtgcccttgacgccctcaggacgttctccaccg
acccagccgcctcctctcaaaatgaatcccatctcgctaccgggcacgcctaccacgacc
tcgttccaatcctccgcgaaacccatgaaatcgctgtttggataccccagcctccaatcg
atgtcatccgtctcgtcggaagatatacttagtccgctgcagctatcagctcagtcgtcg
tttacaggtttgaaaaggccatcgacggtagagtcgccgacacccgccggatcttctgca
gtctcgaatcatagcagcctggctcccactcccactcccactcccactcccgcccgtgtc
cctgttccttcgttcattacaacatcgcagtcatcgacgtctacccccgcccctcttgct
acatcctcccccacgcttgcgcccaccctctccaaggtgaatggcaagggtaaagggcgc
gcaattgactccgcaatcctcgagggaaaggcggtggatttcttgcgaagaagtctcgtc
gtcaagtcctccttccagcaatggcgccacgacactaccgagcgcttgaagtgggtagat
gcagttcgccggagtgacgcatacagcgaacgagtccatagacaatcgctgtctaacggg
aaatcgccaagcaaaaaacgacgagagtcgaacgggattgtcgtcgaagcacccacagca
aagcgcgtgcgaaagcggatgtcaagcaaatacgtaccaccgaggacagacgaccaactc
gcccaacggctgaaagaggtgcttcgtctctcgcagcaaaatcacgatcagcacgagcgc
agatgggctgttgggacgttcctcgaactgattcgtcagcacatacataatgtcgcgaag
agctatccatttgattggtccgtctggctatccacgaattctgacaacgacgggactgca
atatgggtcgagcggaagttcaacgtgccggagtcagggagatgggcgacggagcgcata
ttttcaattcctttgaagcctggcgacgaatcggcagagtccccggggttgatcgtcttc
gagtgctccccactggaaggaatcgaggatgagatcgaacggaagtaccgtatcctcgac
gactgctcgcgtttgcgcgaagttgttgaggccttgcctgaggatcgccactttgtccca
tccatcctgttcattaactggggtgaaggcgaacaggccagcgtttcgcacgatatattg
gccatggtggaagacttcgtggtgaagggcgatctgaatagccattgcacattctctttg
acctcaacaacgatcgacctggatacacggcttttggaatcgcttcgaccaatgccgttg
gatgtgtcagggcggctcatcgaaattctgtcttggaatggtctgctaaaactggtcatt
tccccatggagagaatttgcagaagactgggtgactcgttgcgcagccgacaacgaagtg
gattggcatctatacagtcaagtcctgcgaacgttgattgagttgatgaacattctgtct
cgccatgtgatatctcggtttgataacgtggaatcgtatacggatcctttacctttgctt
ggaaacgacaccatccaagattcacaggccatgtacgaagtcgcgttcgcttggcttgac
cagcccgattttcccgtgaactccttcatagaccatatttacgagctggctctgcgtcgc
acagagtcggttgtccaaccggacaagtcgacgaattatcccatccccaaacgggaaatt
caagctattcgggaggacacggagaagagcatcctaaaatcgggggataagctccgtcgg
acgtttgcgttctttgtgcgtcggaagcgaagagcgcccgacgatgaagcggacatcctc
tcttcctcgacctcaagcaaaaaggctagaactttgtcttcagaaccgacgattgtagat
gatgcattgttcacctctcataccaacggcagtcgcatgtccaacggaagtatgcatccg
ccaccaccttcgcccaccgcatcggcgactacgtccatgaccaccgacacggacggttcg
cttccacgggttacaacagccatgttgcgtgccctgacaaagagtgtgttcaataatcgc
ggggaagcccgctcgtga
DBGET
integrated database retrieval system