KEGG   Heterobasidion irregulare: HETIRDRAFT_55937
Entry
HETIRDRAFT_55937  CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hir  Heterobasidion irregulare
Pathway
hir03030  DNA replication
hir03410  Base excision repair
hir03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HETIRDRAFT_55937
   03410 Base excision repair
    HETIRDRAFT_55937
   03450 Non-homologous end-joining
    HETIRDRAFT_55937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hir03032]
    HETIRDRAFT_55937
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_55937
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hir04147]
    HETIRDRAFT_55937
DNA replication proteins [BR:hir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HETIRDRAFT_55937
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HETIRDRAFT_55937
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HETIRDRAFT_55937
Exosome [BR:hir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HETIRDRAFT_55937
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 20678345
NCBI-ProteinID: XP_009549656
JGI: Hetan2_55937
UniProt: W4JYL8
LinkDB
Position
Unknown
AA seq 552 aa
MGVSGLTPFLQKTCPQVIQKLTNRLQGLSGKTVVIDGTLITQRFHFAPMPHPYRHVLGWY
RLLKELKDNGVNAICVFDGKERSLAKSDEIERRRQVRRVDYARSLIESERLQRLQNLTKV
LENYRCLNPSKRQHAFETLKTILSKPQDLDASLAAELESIVLSTGGRDVQQSADDDWLGL
FDESEIKQILLEDMDVPSSLQGQPAWDVEPFQTRNPSHISQRDPEDTSFSSYDQNYQEDI
SSSLEALYLSYRRSTARLDGLSAPTFSAIRKSVQTDDSSDARAEIAMSKSQHQLTLAEGQ
FWEGLVKSGLPAEGDDALESRLSTIANKSSVIAESYLRRRNPPSSETYQESKAILHAMGV
PCIESTGPFEAEALASSLVLHGLADYVASEDTDVLVYEAALIRNITSRSEPLILVSGTDV
RTSLNLDRASYVDFVLLLGTDFSQRIKNVGPQRALKFIREHGSIEHILEHETQYSPRQPP
ELYLKQVRLARSVFETLPPLPSPELLQPGEYNDKEVCDVLRRYQLSRFMASDDWDSSAAL
EGNYFFDNPAAA
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgggagtgtcgggactgacacctttcctccagaaaacctgccctcaagtcattcagaaa
ctcacgaaccgtctccaaggtctgagcggtaagactgtagtcatagatgggaccctcata
actcaacgctttcacttcgcgcctatgccccacccatacaggcacgtcctcggctggtat
cgtctacttaaagaactaaaggacaacggtgttaacgccatatgtgtatttgatggtaaa
gaacgcagcttggccaaaagtgatgagatcgagcggagaagacaagtgcgaagagtggac
tatgcccgtagtctgattgagtcagaacggctgcaaaggctccaaaatctcaccaaggtt
ctcgaaaactatcgctgtctaaacccaagtaagcgacagcacgctttcgagactctgaag
accatcctatcaaagcctcaagacttggacgcgtctcttgcagctgagctggagtcgatt
gtcttgtcaaccggtggcagggatgtacaacagtctgccgacgatgactggctgggactg
ttcgacgaatccgaaatcaaacaaatcctgttggaggacatggatgtgccatcatctctg
cagggtcaacctgcgtgggatgtcgagccctttcagacacgaaacccgagtcatatctcc
caacgggacccagaagacacttccttttcttcgtacgaccaaaactatcaggaagacata
tcgtcttcccttgaggctctctatctcagctatcgccggagcacagcccgactagacgga
ctatcggcgcctacgttttctgccatccgcaaaagcgtgcagacggacgactcgagcgat
gcccgcgccgagatcgccatgtcgaaatcacagcatcagctcaccctcgctgagggccag
ttctgggaaggtcttgttaaatcaggcctgccggcagaaggcgatgatgcactggaatcg
cgcctttcgaccatcgctaataagagcagtgtgatcgcggaatcatacctccgtaggcgg
aatccaccatcgtctgaaacctaccaggaaagtaaagccatcctccatgccatgggcgtg
ccatgcatagagtccactggcccctttgaagcggaggcattagcatcatcgctcgtccta
catggcctggctgattatgttgctagcgaagacacggacgttctcgtatatgaagcggcc
ttaattcgcaacatcacaagtcgttcagaaccactcatactcgtctctggtacggacgtg
cgcacgtcgctcaaccttgatcgagcgagctacgtcgactttgtccttctgctcggcaca
gacttctcgcagcgtatcaaaaacgtgggcccccagcgtgccctcaagtttattcgcgag
cacgggtccatcgagcacatcctggagcacgaaacccaatactctccgcggcagccgccc
gagctgtacctcaaacaggtgcgcctcgcgcgcagtgtgttcgagacgttaccgcctctg
ccatcacctgagctcctccagccgggcgaatataacgacaaagaagtctgtgacgtccta
cgaagataccagcttagtcggttcatggcgagcgatgattgggattcttcggccgctctc
gaaggcaattacttcttcgataatccagccgctgcataa

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