Haematospirillum jordaniae: AY555_05420
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Entry
AY555_05420 CDS
T04366
Name
(GenBank) hypothetical protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hjo
Haematospirillum jordaniae
Pathway
hjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AY555_05420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hjo03019
]
AY555_05420
Enzymes [BR:
hjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AY555_05420
Messenger RNA biogenesis [BR:
hjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AY555_05420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AMW34711
UniProt:
A0A143DD80
LinkDB
All DBs
Position
1167068..1168399
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AA seq
443 aa
AA seq
DB search
MTASAPEEPRRVWSRRERPPWGQLGPVPWLSWPETKAVVDALQAEGSTVRFVGGCVRDAL
LGVMPRDIDLATPDPPDTVIRLLEQAGLRCIPTGLQHGTVTARVGDHSFEITTLREDVET
DGRHAVVKWSSCWMADAARRDFTINALSATPDGAVYDYFDGLEHLSHGRVVFVGRPMQRI
AEDWLRILRFFRFYARFGRPPASAGALSACQALAPHLKELSAERIRDELIGILETPACTD
VLLLMRGARVLEQILPEAVAFGRLRQLVFLETRGLVMDGVEPDPVRRLAAVLHTDPHTAM
QVARRLRLSSHQMQRLSVLSDTTPCPDPDGGEPLLLPALFRLGRKTVVDMILLVWSSERD
GEHRLCPRRSASWQRALDLALSLPVPSFPLKGRDLLANGYRSGPLLGQELARLQGEWLHS
GCRLDRAALLSSLRPPSPDPEAG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtccgccccggaggaaccccgtcgggtctggtcacgccgggaacgtcctccg
tggggtcagttggggcctgtcccctggctgtcgtggccggaaaccaaggcggttgtggat
gctcttcaggctgaaggatccactgtgcgctttgttggcggttgtgtccgtgatgccctg
ctgggggtcatgccgcgcgatatagacctagccacccctgatcctcccgatacagtgatc
cgtctgctggagcaagctggcttgcgctgtatacccactggcctgcaacacggtaccgtg
accgcccgggtgggagatcacagttttgaaatcaccaccctgcgggaagatgtggaaacg
gacggccggcatgccgttgtgaaatggtcgtcctgctggatggctgatgcggcccggcgt
gattttaccatcaatgccttgtcggcaaccccggacggtgcggtctacgattactttgac
ggtcttgagcatctgtcgcatggccgggtggtgtttgtgggccgcccgatgcagcgtatt
gccgaagactggctgcggatcctgcggtttttccgcttctatgcgcgttttggccgcccc
ccggccagcgcgggtgccctgtcggcttgccaggcgctggccccgcatctaaaggagctg
tcggccgaacgcatccgtgatgaactgatcggcatcctggaaacgccggcctgtaccgat
gttctgttgctgatgcgcggggcccgggttctggaacagattctgcctgaggcggttgcg
ttcgggcggttgcgtcagctggtgttcctggaaacacggggcctggtgatggatggcgtt
gaacccgatcctgtgcgtcggttggctgcggttctgcacactgatccgcacaccgccatg
caggtggcccgccgcctgcgcctgtcatcgcatcagatgcaacgcctgtccgttttgtcg
gataccacgccttgccccgacccggatgggggggaaccccttcttcttccagctcttttc
aggctggggcgaaagacggtggtggacatgatccttctggtgtggtcctctgagcgcgac
ggagagcacaggctgtgtccccggcgcagcgcttcgtggcaacgtgccctggatctggcc
ctgtcgctgcccgttccgtcattccccctgaaaggccgggatcttttggccaatggatac
cggtccgggccacttcttggccaggagctggcgcgacttcagggggagtggcttcacagc
gggtgccggctggaccgtgccgcccttctgtcatccctgcgtcccccgtcgccggacccc
gaagcagggtga
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