Halostagnicola larsenii: HALLA_15010
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Entry
HALLA_15010 CDS
T03008
Name
(GenBank) uracil DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hlr
Halostagnicola larsenii
Pathway
hlr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HALLA_15010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlr03400
]
HALLA_15010
Enzymes [BR:
hlr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HALLA_15010
DNA repair and recombination proteins [BR:
hlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HALLA_15010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHF99903
UniProt:
W0JMT6
LinkDB
All DBs
Position
1898148..1898780
Genome browser
AA seq
210 aa
AA seq
DB search
MKNVTDRTSNPFGMRPPFERQDAGKQPAVFGYGDANADFQVIGGHPGVHGGETTGVPFTE
TDDGTAVQQLFRDAEFVTGPTNDPRLENLFADYIHMCSLPDGRAPTPEEYAELERYFDAE
LRAINAHILLPVGERATDHVLGEYTTQRGKLDLEMDALHASEIRGRGFLVVPIRNPTEWT
DGDRDAILETIESILASDYRQTKGVATTVG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacgtcaccgataggacgagcaaccccttcggcatgcggccaccgttcgaacgg
caggacgcggggaaacagcccgccgtcttcggttacggtgacgccaacgccgactttcag
gtgatcggcgggcatcccggcgttcacggcggcgagacgaccggcgtcccgttcaccgaa
accgacgatggcaccgcagtccagcaactctttcgcgacgccgagttcgtcaccggcccg
acgaacgacccccgtctcgagaacctgttcgccgactacatccacatgtgctcgctaccc
gacgggcgcgcaccgacgcccgaggagtacgccgaactcgagcgctacttcgacgcggaa
ctccgggcgatcaacgcccacatcctgctcccggtgggcgaacgcgcgaccgaccacgta
ctgggcgagtacaccacacaacggggaaaactcgatctcgagatggacgccctccacgcc
agcgaaattcgcggccgcggattcctggtcgttcccatccgcaacccgaccgagtggaca
gacggcgatcgggacgcgatcctcgagacgatagagtcgatcctggcgagcgactaccgc
cagacgaaaggcgtcgcgacgaccgtcggctaa
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