KEGG   Halostagnicola larsenii: HALLA_18935
Entry
HALLA_18935       CDS       T03008                                 
Name
(GenBank) DNA polymerase
  KO
K04802  proliferating cell nuclear antigen
Organism
hlr  Halostagnicola larsenii
Pathway
hlr03030  DNA replication
hlr03410  Base excision repair
hlr03420  Nucleotide excision repair
hlr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hlr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HALLA_18935
   03410 Base excision repair
    HALLA_18935
   03420 Nucleotide excision repair
    HALLA_18935
   03430 Mismatch repair
    HALLA_18935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hlr03032]
    HALLA_18935
   03400 DNA repair and recombination proteins [BR:hlr03400]
    HALLA_18935
DNA replication proteins [BR:hlr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HALLA_18935
DNA repair and recombination proteins [BR:hlr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HALLA_18935
   MMR (mismatch excision repair)
    Other MMR factors
     HALLA_18935
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    HALLA_18935
SSDB
Motif
Pfam: PCNA_N PCNA_C Caudo_bapla_RBP_neck
Other DBs
NCBI-ProteinID: AHG00552
UniProt: W0JTB3
LinkDB
Position
2632365..2633108
AA seq 247 aa
MFKAIVSAETLTSTLDSISVLVDECKIHLEEEGLEIRAVDPANVGMVDLSLDAAAFESYE
ADGGLIGVDLSRLEDIAGMAESGQLIQFELDEETRKLHIQIDGLEYTLALIDPDSIRQEP
DIPDLDLPAEVVLEGKDLNRSVKAADMVSDHIALGVDESEEFFYVNAEGDTDDVHLELTR
DDLIDLQVGPARSLFSLDYLKDMNKAIPADTEVTLALGEEFPIKMFFGYGDGNGQVTYML
APRIQSD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggccatcgtgagcgcggaaacgctcaccagcacgctcgattcgatcagcgtg
ctggtcgacgagtgcaagattcacctcgaggaagaaggcctcgagattcgggccgtcgat
cccgccaacgtcgggatggtcgacctctcgctcgatgcagccgcgttcgaatcctacgaa
gccgacggcggactgatcggcgtcgacctctcgcggctcgaggacatcgccggcatggcc
gaatccggccagctcatccagtttgaactcgacgaagagacgcgcaagcttcacatccag
atcgacgggctcgagtacacgctcgcgctcatcgatcccgactcgatccgacaggagccg
gacattccggatctcgacctgccggccgaagtcgtcctcgagggcaaagacctcaaccga
tcggtcaaagccgccgatatggtctcggaccacatcgcactcggcgtcgacgaaagcgag
gagttcttctacgttaacgcggagggagacaccgacgacgtccatctcgagttgactcga
gacgacctgatcgacctgcaggtcggtccggcacgctcgctgttctcgctcgattatttg
aaggacatgaacaaggcgattcccgcagataccgaagtgacgctcgcactcggcgaagag
ttcccgatcaagatgttcttcggctacggcgacggaaacgggcaggtcacgtacatgctc
gcgccgcggatccagagcgactga

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