Haloarcula marismortui: rrnAC2042
Help
Entry
rrnAC2042 CDS
T00211
Symbol
oppD1
Name
(GenBank) oligopeptide ABC transporter ATPase component
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
hma
Haloarcula marismortui
Pathway
hma02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
rrnAC2042 (oppD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hma02000
]
rrnAC2042 (oppD1)
Transporters [BR:
hma02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
rrnAC2042 (oppD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAV46899
UniProt:
Q5V0Q4
LinkDB
All DBs
Position
I:1830745..1831926
Genome browser
AA seq
393 aa
AA seq
DB search
MALLEVENLTVNFYTEEGVVTAVDDLSFRINRGEKFGVVGESGAGKSVTALSVMRLIEEP
GRIESGTIRFDGQDLTELSDSEVRDVRGNDVAMIFQDAQTALNPVYTVGEQISEAIRHHL
DYDDTAARERTIRLLDDVGIPEPEARYDDYPHEFSGGMQQRAIIAMALSCDPELLIADEP
TTALDVTIEAKILDRLNRLADEYDTAIQLITHDLGVIAEMCDRVMVMYAGRAVEKASVEE
LYYDPKHPYTVGLMSAIPRIGDRQDRLKTIPGTMPDLVEVPSGCSFHPRCPFAEEVCTRK
QPPLVDPETGDGVGLSDRGAACLAYTGDLDDELDYEVEVQGRDTPPDNTQPGSRSGRTDA
DPLRTDSDPVGLDTDLLDRDGNADNDTGGQQDG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctcgaagtcgagaacctcacggtgaacttctacaccgaggagggcgttgtc
accgccgtcgacgacctctcgtttcgtatcaaccgcggcgagaagttcggcgtcgtcggc
gagagcggcgcgggcaagagcgtcaccgcgctgtcggtaatgcgactcatcgaagagccc
ggccgtatcgagagcgggacgattcgttttgacggccaggacctcaccgaactgtccgac
tccgaggttcgagatgtccggggcaacgacgttgcgatgatatttcaggacgcacagacc
gcactcaaccccgtctacaccgtcggcgaacagatttcagaggctatccggcaccacctc
gactacgacgacacagccgctcgcgaacgcacgattcggctgctcgatgatgtcggtatc
ccggaacccgaagccagatacgacgactacccacacgaattctccggcgggatgcaacag
cgggccatcatcgcgatggcgctgtcctgtgaccccgaactcctcatcgccgacgagccg
acgacggcgcttgacgtgaccatcgaggcgaagattctggaccgcctcaaccggctcgcc
gacgagtacgacacggcgattcagctcatcacccacgacctcggcgtcatcgcggagatg
tgcgaccgggtgatggtgatgtacgccggccgcgctgtcgagaaagcttctgtcgaagaa
ctgtactacgacccaaaacacccctacaccgtcgggctgatgagtgctatcccgcgtatc
ggcgaccggcaggaccgcctcaagacgattccggggaccatgccggacctcgtcgaagtg
ccatcgggctgtagcttccacccacgctgtcccttcgccgaggaggtctgtacgcgcaaa
caaccaccgctcgtcgacccggagaccggcgacggcgtcggcctgtctgaccgcggagcg
gcctgtctggcctacaccggcgaccttgacgacgaactggattacgaggtcgaggtacag
ggtcgcgacacgccgcccgacaacacacagcccggctcccgctccggacggacggacgca
gatccactccggacagactccgatccggtcggcctcgataccgacctgctagaccgggac
ggcaacgcggacaacgatacggggggccagcaggatggctaa
DBGET
integrated database retrieval system