Hydrogenovibrio marinus: HVMH_1316
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Entry
HVMH_1316 CDS
T06677
Name
(GenBank) DNA-deoxyinosine glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HVMH_1316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmar03400
]
HVMH_1316
Enzymes [BR:
hmar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
HVMH_1316
DNA repair and recombination proteins [BR:
hmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HVMH_1316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGL
Motif
Other DBs
NCBI-ProteinID:
BBN59722
LinkDB
All DBs
Position
complement(1405363..1405803)
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AA seq
146 aa
AA seq
DB search
MPSVASLEESFYYAHPRNAFWPILSDYFKLPIESTEQKVALCKQSGILLWDVLSSCERQG
SLDSAIKQPEANDFASLFQQYPSLKTILFNGKAAQNLFEKQVTKKQALPDDLVFFSLPST
SPANAQLTFENKRVLWHETLEQVLSK
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtgtcgcttccttggaagagtctttttattatgcgcatccgcgcaatgccttt
tggccgatactgtctgattactttaaactgccgattgagagcactgagcagaaagtcgcg
ctctgtaagcaaagtggtattttattgtgggatgtgctctcaagctgtgagcggcagggg
agtttggactccgcgattaaacaacccgaagccaatgattttgcatcgctttttcaacaa
tatcccagtctgaaaaccattctatttaatggcaaggcagcccaaaacctgtttgaaaaa
caggtgaccaaaaagcaagctttaccggatgatttggttttcttttcactcccttcaacc
agccctgcaaatgcccaattaacctttgaaaacaaaagggttttatggcatgaaacactt
gagcaagtgttatccaaataa
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