Hydrogenovibrio marinus: HVMH_2127
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Entry
HVMH_2127 CDS
T06677
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HVMH_2127 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmar03400
]
HVMH_2127 (priA)
Enzymes [BR:
hmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HVMH_2127 (priA)
DNA repair and recombination proteins [BR:
hmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HVMH_2127 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_30
zinc-ribbons_6
PIF1
TrwB_AAD_bind
AAA_11
zinc_ribbon_15
Grg1
PolC_DP2
Motif
Other DBs
NCBI-ProteinID:
BBN60533
LinkDB
All DBs
Position
complement(2274570..2276816)
Genome browser
AA seq
748 aa
AA seq
DB search
MFIQVAVPGPFLTPLDYQYVYDEKQILPVVGGRVWVPFRNRKLIGVVMSIKETTDLDVKK
IRLISEVVDAAPIFSERDLQFLQWAAHYYHEPIGNVMQTALPKRLKEGEAVALEGVTAWQ
LNDTGRAEAADKIRSNAIQQLNVLEFLKSHPYPVTESTLTACLSGWRTPMKRFHEMGWVD
KTEKNCLHAWQQAEDPNHSLNEEQQAAVDAVLDKALQTEDFHAFLLEGVTGSGKTETYLG
MIESTIAQGKQVLVLVPEIGLTPQTVERFERFLNQPVAVMHSDLTDRERHCAWYMVQSNQ
VKVLLGTRSALFTPFANLGLCILDEEHDLSFKQQDNFRYSARDALVRRAQLEKVPVVLGS
ATPSLETLHNAMSGRYGYLKLTQRAGGASMPEMRLLDVRGDKSVQQHEGVSSALREMITN
HLEQQGQVLLFLNRRGFAPVLMCHSCGWQAACPSCDANMTYHHQFRELRCHHCGYQQKAP
QACPSCGEQEFVNVGQGTEKLETIIQSWFPNYKTLRIDRDTTRNKGQMAEATQLAREGKA
DILIGTQMLAKGHHFPKVTLVALLDIDQGLFSCDFRAAERMAQLVVQVAGRAGRAEREGE
VVIQTHHPDHPLLKTLVEHGYDAFAKEALDERKAGELPPFSYQILLRAESIDPHSAWQFL
LDIESALQLKAVDQTKSARLGSAPLEAFGPVSAPMLRRQGRFRYQLLLQSSHRGLLHHWL
GSLESNIYAHPLVNKVRWSIDVDPQEMS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttattcaggtcgccgtgccagggccgtttttgacgcccttggattatcaatatgtc
tatgatgaaaaacagattctgcctgtggttggcggacgtgtctgggtgccgtttcgtaat
cgaaaactaatcggcgttgtcatgtcgataaaggagacgacggatctcgatgtgaaaaag
attcgtctgatttccgaagtggtggatgccgcaccgattttttccgagcgcgatttgcag
ttcttgcaatgggcggcgcactattatcacgaacctatcggcaatgtgatgcagacagca
ttgcctaaacgcttgaaagaaggcgaggcggttgcgttggaaggtgtcacggcatggcag
ttgaatgacacgggtcgtgccgaagcggcagataaaatccgttcaaatgccatccagcaa
ttgaatgtgctggaattcctcaaatctcatccttatccagtaacggaatcgactttaacc
gcttgtttgagtggctggcgcacaccgatgaaacgtttccatgaaatgggttgggtggac
aaaaccgagaagaattgcctgcatgcgtggcagcaagcggaagacccgaatcactcattg
aatgaagaacaacaggcagcagtggatgcggtattagataaagcgttgcagacagaagat
tttcatgcctttttgttggaaggggtgaccggcagcggtaaaacggaaacctaccttggc
atgatcgaaagtacgattgcacaaggcaaacaggtattggtgttggtgccggaaattggg
ctaacgccgcaaaccgtagagcgattcgaacggtttttgaatcaacctgtggcggtgatg
cattcggatttgaccgacagagaacgccactgcgcttggtatatggtgcagtcaaatcaa
gtgaaagttttgttggggacgcgttcggcattattcacaccctttgccaatttggggttg
tgcattctcgatgaagaacatgacctgtctttcaaacaacaggacaacttccgttactcg
gcacgagatgccttggttcgtcgtgcgcagttggaaaaagtgccagtggtgttggggtca
gcgacgccgtctttggaaaccttgcacaatgccatgtcgggacgatatggctatctgaaa
ctgacgcaacgcgccggtggtgcatccatgcctgaaatgaggttgctggatgtgcgtggt
gataaatcagtgcagcaacatgaaggggtttcttcagccttacgagagatgattacaaat
catcttgagcaacaagggcaggtgttattgttcttgaatcgccgaggattcgcaccggtg
ctgatgtgtcatagctgtggctggcaggcggcatgcccgagttgcgatgcgaatatgact
taccatcatcaattccgtgagttgcgttgccaccattgtggttatcaacaaaaggctcca
caagcttgcccgagttgtggcgagcaagagtttgtgaatgtcggtcagggcacggaaaaa
ctggaaaccattattcagagttggttcccaaactataagactttgcgtatcgaccgtgac
accacccgaaacaaaggtcagatggcggaagccacgcagcttgcccgtgaaggtaaggcg
gatattctcattggcacgcaaatgctggcgaaggggcatcactttcctaaagtgacattg
gtggcgttgttggatatcgaccaaggcttgttcagttgtgacttccgtgcggcggaacgc
atggcgcaattggtggtacaggttgccgggcgtgcagggcgtgcggaaagagaaggcgag
gtggtgattcagacgcatcaccccgaccatccgttactgaaaactttggtcgagcatggt
tatgatgcctttgccaaagaggcattggacgaacgtaaagcgggagagctaccgccgttt
agttatcagattctattgcgtgcggaatctattgacccgcattccgcttggcagtttctt
ttggacatagaatcagcattgcaattgaaagcggtcgaccagacaaaatctgccaggttg
gggtcagcgcctttggaggcgtttggcccggtttccgcaccgatgttacgacgacaagga
cgatttcgttatcagttgttgctgcaaagttcgcaccggggattgctacatcattggttg
ggtagtctggagtcgaatatctacgcgcacccgctggtgaacaaggtgcgttggtcgata
gatgtcgatccgcaagagatgagctga
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integrated database retrieval system
