Hyphomicrobium sp. MC1: HYPMC_0768
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Entry
HYPMC_0768 CDS
T01557
Name
(GenBank) two-component sigma-54 specific transcriptional regulator, Fis subfamily; with N-terminal response receiver, GAF and putative ATPase domains
Organism
hmc
Hyphomicrobium sp. MC1
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
HTH_7
Mg_chelatase
HTH_50
HTH_17
HTH_23
AAA_16
AAA_3
HTH_22
CENP-B_N
RWP-RK
HTH_28
AAA_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CCB64001
UniProt:
F8JIQ9
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Position
complement(755998..757512)
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AA seq
504 aa
AA seq
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MKMSKRILIVDDDPAQRRILEETIKRFGFETKSCGSGEQAVQVLEGQERPQIGLVLLDLI
MPGMDGMAVLDRVGHVAGMPPIIVQTANGSIETAINAMRRGAVDFVVKPASPERLEVSIK
SALKIEALTDEITRIKKTAEGKLTFGDLVLRGEAMTRVITLGKRAAASNIPVLIEGESGV
GKELIARAIQGESDRAGQPFITVNCGAIPENLIESILFGHEKGSFTGAIDKRTGKFQEAD
GGTLFLDEVGELPLEAQVKLLRALQEGEIDPVGSKRPVKVNFRLISATNRDMIQQVKDGK
FREDLYYRLNVFPIFVPPLRERVEDIPELARHFIARFAAEEGKRVTTISDRAMRLLQAYS
WPGNVRQLENAVFRAVVLADGPELTVSEFPQIAAHVDGFEAEIPAAPSVVQKPQAYTGPA
LLGAENTVPHTVEMKTSSAGSALGIQAMAEDGEIRSLEAIEADMIRLALGRYRGHMTEVA
KRLNIGRSTLYRKMQEYGLEPRTN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatgtcaaagcgtattctgatcgtcgatgacgatcctgcccagcgtcgaattctc
gaagagacgatcaagcgatttggcttcgagaccaagtcatgtggctccggcgaacaggcc
gttcaagttctcgaaggccaggaacgcccccagatcggtctcgtcctgttggacttgatc
atgccgggaatggacggcatggccgttcttgaccgtgtcggccacgttgctggcatgccg
ccaatcatcgtgcagacagcgaacggctcgatcgaaaccgcgatcaacgccatgcgccgc
ggcgcagtcgatttcgtcgtcaagcccgcctcgccagaacggctcgaggtatccatcaag
agcgccctcaaaattgaagcactgacggacgaaatcacgcgcatcaagaaaaccgccgaa
ggcaagctgacgttcggcgatctcgttctgcgcggcgaagcgatgacgcgtgtcatcacg
ctcggcaagcgcgccgccgcatcgaacatcccggttctgatcgaaggggaaagcggcgtc
ggcaaggaactcatcgcacgcgccattcaaggcgagagcgatcgcgccggccagcccttc
atcacggtgaactgcggagcgattcccgaaaacctgatcgaaagcattctgttcggtcac
gagaagggatcgtttaccggcgccatcgacaagcgcaccggcaaattccaagaagccgat
ggcggcacgctcttcctcgacgaagtcggcgagttgcccttggaagctcaggtgaagttg
ctgcgcgccctgcaggaaggcgagatcgatccggtcggctccaagcgtccggtgaaggtc
aacttccgcctcatctcagcgacgaaccgtgacatgatccagcaggtcaaggacggcaag
ttccgcgaggatctctactaccgtctcaacgtcttcccgatcttcgttccgcctctgcgt
gaacgcgtcgaagacatccccgagcttgcgcgccacttcattgcccgcttcgccgccgag
gaaggcaagcgcgtgaccacgatctctgaccgtgccatgcgtttgctgcaggcctactcc
tggccgggcaacgttcgccagctcgagaatgcggtcttccgcgcggtcgtcctggccgac
ggtcctgaactcacggtttcggaattccctcagatcgccgcccacgtcgacggcttcgag
gccgaaattccggccgcaccttcggtcgtccagaagccgcaggcctacaccggcccggcc
cttctcggcgccgagaacaccgtcccgcataccgtcgagatgaagacctcatcggcggga
agtgcgctcggtatccaggctatggctgaggacggcgaaatccgctcgctcgaagccatc
gaagccgacatgatccgcttggctctcggccgttatcgcggccacatgacggaagtcgcc
aaacggctcaacatcggacgctcgacgctttaccgcaaaatgcaggaatacggcctcgag
ccccgcaccaactag
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