Hyphomicrobium sp. MC1: HYPMC_3833
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Entry
HYPMC_3833 CDS
T01557
Name
(GenBank) Uncharacterized RNA pseudouridine synthase RBE_0321
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmc03009
]
HYPMC_3833
Enzymes [BR:
hmc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HYPMC_3833
Ribosome biogenesis [BR:
hmc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HYPMC_3833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CCB67043
UniProt:
F8J5D4
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All DBs
Position
3670460..3671287
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AA seq
275 aa
AA seq
DB search
MPPPANRDGPMRIAKAMARAGLCSRREAERWIADGRVSVNGKLLKTPAIEVKPGDKVIVD
GKPLPSAEPPQLWRYHKPKGIVTTHSDPEGRPTVFDKLPPEMPRVISVGRLDFNTEGLLL
LTNDGALARHLELPANGWVRRYRVRAKGRVSPDDLAKLKDGVTIDGVNYGPVEAQVDSVQ
GANTWLTIAIREGKNREVRNVLSHLGLTVNRLIRVSFGPFQLLDLQPGAVEAVRRKVLIA
QLGPRTSEALGLSESQAQRKERHARGKAASEADDR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtgcctccccccgcgaaccgcgacgggccgatgcgcatcgcaaaagcgatggcgcgtgca
gggctctgctcgcgccgagaggccgaacgctggatcgccgatgggcgcgtcagcgtcaac
ggcaagctgctgaagacgccggccattgaagtcaaacccggcgacaaggtgatcgtcgac
ggcaagccgctgcccagcgccgagccgccgcagctttggcgttaccacaagccgaagggc
atcgtcacgacgcattcggacccggaaggccgcccgacggtgttcgacaagctgcctccc
gagatgccgcgcgtgatctccgtcgggcggctcgatttcaatacggaagggttgctgctc
ttaaccaatgacggcgcgctggcgcggcatctggagcttccggcaaatggctgggtgcgg
cgctaccgggttcgcgccaaaggccgcgtttcgcccgacgatctcgccaaacttaaggac
ggtgtcaccatcgacggcgtgaactacggcccggtcgaagcgcaggtcgatagcgtgcaa
ggcgccaatacgtggctgacgattgcgatccgcgaaggcaagaaccgcgaagtgcgcaac
gtgctttcgcatctgggcttgacggtgaaccggctgatccgcgtctcgttcgggccgttt
cagcttctcgatctacagccgggggccgtcgaagccgttcgccgcaaggtgctgatcgca
cagctcggaccgcgcacgtccgaagcactcgggctgtcggaaagccaggcacagcgcaaa
gaacgccacgcacgcggcaaggcggcgagcgaggccgacgacagatga
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