Hydra vulgaris (swiftwater hydra): 100202185
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Entry
100202185 CDS
T01080
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100202185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100202185
03036 Chromosome and associated proteins [BR:
hmg03036
]
100202185
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100202185
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100202185
PBAF complex
100202185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF4618
HALZ
Astro_p19
Endotoxin_C2
Casein
Motif
Other DBs
NCBI-GeneID:
100202185
NCBI-ProteinID:
XP_047135949
LinkDB
All DBs
Position
7:5818616..5872172
Genome browser
AA seq
347 aa
AA seq
DB search
MSRMKEKAVTFMPNEIKIPKPPKQPDKPLPAYMRYSRKVWEAVKMQHPEMKMWDIGKLIG
EQWRNLPEDERQGFFAEYEVEKLEYQDAMKFYHNSNAYREWLKAKEKAQNALQEQQMMEK
MIGANIPKEEPRFQLQQVDDEEEEEDFSAKNVAAARYQRNHRLIAEIFTETSVPNIKSVV
TRARLENLKKQVQSLMQHQRKLESEIQDMETKFNEKKRKILENSENFITAMNKVPKYLDI
KENSVEKIKPEVQDTPLESDAMKNRLLESSDNFIANMKKLLDPSKPDNINFGNTDNINFG
NTDDNVADTDSKSLCAQLRLFIKDEQDALVERASKFSSDSILPTSEK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtatgaaagaaaaagctgttacatttatgccaaatgaaatcaaaattccgaag
cctcctaaacagcctgataaaccattacctgcgtacatgaggtatagtagaaaggtgtgg
gaagcagtaaaaatgcaacaccctgaaatgaaaatgtgggatattggaaagttaatcgga
gaacagtggaggaaccttcctgaagatgaaaggcaaggattttttgcagaatacgaagtt
gaaaagcttgaatatcaggatgctatgaaattttaccataattctaatgcatacagagag
tggttaaaagctaaagaaaaagcgcaaaacgctttacaagagcagcagatgatggaaaaa
atgattggtgcaaatattccaaaagaagaaccaagatttcaacttcaacaggtagacgat
gaagaagaagaagaagatttttctgcaaagaatgtagcagctgcaagatatcaacgcaac
catcggttaattgctgaaatatttacagaaacttcagtacctaatataaaatcagttgtc
acaagagcaaggttagaaaatctcaaaaagcaagttcagtcacttatgcaacatcagaga
aaactggaaagtgaaattcaagacatggaaacaaaattcaatgaaaagaagagaaaaata
ttagaaaatagcgaaaattttattactgctatgaacaaggttcccaagtatttggatata
aaagaaaactctgtagaaaaaattaaaccagaggttcaagatacgccattggaatctgat
gcaatgaagaacaggctgcttgaaagtagtgataatttcatagccaatatgaaaaagctt
cttgatccgtcgaagccagataacataaactttggtaatacagataacataaactttggt
aatacagatgataacgtggcagataccgatagtaagtcgttatgcgctcaactacgcctc
ttcatcaaagatgagcaagatgcattggtagaaagagcatcaaagttttccagcgattct
atattaccaacttcagaaaaataa
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