Hydra vulgaris (swiftwater hydra): 100206865
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Entry
100206865 CDS
T01080
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
100206865
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
100206865
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
TPR_1
TPR_2
TPR_6
TPR_8
TPR_17
SDP_N
Motif
Other DBs
NCBI-GeneID:
100206865
NCBI-ProteinID:
XP_047129027
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All DBs
Position
3:42093963..42112585
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AA seq
628 aa
AA seq
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MFLQRKKCCNVTVRCKQRESEPICLKMFERDIQVSRSFVKMIDLENELEEHNGCVNCLEW
SSCGDYLLSGSDDTQIILWDVRKRKSSVKITTTHQGNIFSVKFLPYSSDNIVASSAADQV
INLYNVNTKSEIHSFKCHSGRVKKLAVSNHSPFLLWSGSEDGTLREFDLREAYHDCSSSC
SNILINLRQHVSYTNEIKCIQVHPTYPELIAVGCNDAYLRLFDRRMLKHDNVASLNDKCA
DYFVPGHLLPTSSKCLKRRLFVTTHISFSPCGTEVLQNLGGDHIYSYNLLEKKNSIKFKF
LHNNHFASHDKVEDVNFTNKYANVLNNAKNSVLNSKAIKLKMKGNEAFTKKNYYRAIVYY
NKALAIFPYNSVLLANRGAALIQRKWNGDVYSSLCDSQAAVALDPFHHKAFLRQVKCLQE
LKMHSEALKCFELFKEKFPEEYKSATAKQLEADIKQSMNVKNAENNSRLPESKHNNKDEH
SRREKSYDFSNRFVGTCNITTDIKEASYFGAYGQYIAAGSDCGCMFIWERNSANIVKVLH
GDESIVNCVQPHPTTCLIATSGIDPVVRLWSPQFESKKKELNIQDLVCSNQKNLNSDPLD
EMLRTMGYIPALSDDDDSDEPRVNCATS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgcagcgcaagaaatgttgcaatgtcacagtacgttgcaagcaaagagaatct
gagccaatttgtttaaaaatgtttgaaagagatatccaagtttcacgttcttttgttaaa
atgattgacttggagaatgaattagaggaacataatggttgcgtaaattgtctagaatgg
agttcttgtggagactatttactttccggctctgatgatactcagataattctttgggat
gtcagaaaaagaaaatcaagtgtaaaaataactacaactcatcaaggaaacattttttca
gtcaagtttttaccttattcttctgataacatcgttgcatcttctgcagctgatcaagtc
attaacctgtataatgtaaacacaaaatcagaaattcattcattcaaatgtcattctgga
agagtgaaaaaattagctgtttcaaatcattccccatttttactttggagtggttcagaa
gatggtaccttacgggaatttgatttacgggaggcctatcatgattgctcgtcttcttgt
tctaatatacttattaatcttcgacagcatgtaagctatactaatgaaatcaaatgtatt
caagtacatccaacttatccagagcttatagcagtaggttgtaatgatgcttatttacgt
ttgtttgacagaagaatgttaaagcacgacaatgtagcaagtttgaatgataaatgtgca
gattattttgtacctggtcatttacttccaacatcatcaaaatgtcttaaacgaagactt
tttgttactactcatatatctttcagtccttgtggtactgaggttctccaaaatcttggg
ggagaccatatatactcttataatttattggagaaaaaaaattccattaagttcaagttt
ttgcataacaatcattttgcatctcatgataaagttgaagatgttaattttactaataaa
tatgcaaatgtactgaacaatgcaaagaatagtgttttaaatagtaaagcaattaaatta
aaaatgaaaggaaatgaagcatttacaaaaaaaaattattatagagcaattgtttattac
aataaggcacttgcaatttttccatacaattcagttttgttagctaatagaggagctgct
ttgattcaacgcaagtggaatggtgatgtgtattcttctttgtgtgatagtcaagcagct
gtggcgcttgatccatttcatcacaaagctttccttagacaagttaaatgtctacaagaa
ttaaaaatgcacagtgaggccttaaaatgctttgagttatttaaagaaaaatttccagag
gagtataaaagtgctactgccaaacaactagaggcagatatcaaacaatctatgaatgta
aaaaatgcagaaaataattctcgtttaccagagagcaaacataataacaaagatgaacat
tcgaggcgagaaaaatcttatgatttctcaaatcgttttgttggtacatgcaatataaca
actgatataaaggaagcaagttattttggcgcatatgggcagtatattgctgctggaagt
gattgtggttgcatgtttatttgggagcgtaattctgctaatattgtaaaagttttacat
ggagacgaatctattgtaaattgtgttcaaccacatcctacaacttgcttaattgcaaca
agtggcattgatccagttgttcgtttatggagtccacagttcgaatcaaagaaaaaagaa
cttaatatacaagacttagtttgttctaatcaaaaaaatttaaactctgatccattagat
gaaatgctaaggactatgggatacatacctgcactatctgatgacgatgacagtgatgaa
ccacgcgtaaattgtgccacaagttaa
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