Hydra vulgaris (swiftwater hydra): 100212723
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Entry
100212723 CDS
T01080
Name
(RefSeq) mRNA export factor RAE1
KO
K14298
mRNA export factor
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100212723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100212723
03036 Chromosome and associated proteins [BR:
hmg03036
]
100212723
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100212723
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100212723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
100212723
NCBI-ProteinID:
XP_002160482
UniProt:
A0A8B6XJE8
LinkDB
All DBs
Position
2:70360163..70373488
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AA seq
355 aa
AA seq
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MSLFGGTSSFSFGSSLTTASKDVEVQQPPSDTISCLKFSPNANFLAATSWDNKIRCWEIQ
ATGTSVPKAEQSHLKPILSCCWHADGTKLFSAGADNQAKIWDLASNQAVVCAQHDAPIKT
VHWIQAPNYQCLMTGSWDKTLKFWDTRQSTPIKSFNTMEKVYCADVIYPMAVVSTAQRGI
LVYQLMNEPAEFKKIESPLKYQHRSIAICKDANGAPTGFALGSVEGRIAMQYIQPADPKD
NFTFKCHRSEVTSANQVQDIYAVNDIAFHPQHGTLATAGSDGKYSFWDKDARTKLKTSDG
CPQPITACCFNFDGSIFSYAIGYDWTKGHEFYNTNLKPAIFLRNCGDELKSRSKK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcattatttggtgggacaagttcatttagctttggctcttctttgacaacagcgtct
aaagatgttgaagtacaacaaccaccatctgatacaattagttgcttgaagtttagtcca
aacgcaaattttttggcagctacttcttgggataataagattcgctgttgggagattcaa
gcaactggaacaagtgtaccaaaagctgaacaatctcatttgaagccaattttgtcttgt
tgctggcatgcagatggcacaaaacttttttcagctggtgctgataatcaagcaaaaatt
tgggatctggcttcaaaccaagctgtagtctgtgctcagcacgatgctccaattaaaaca
gttcactggattcaagcaccaaactaccagtgtttaatgacaggaagttgggataaaact
cttaagttctgggataccagacaatccactccaataaaatcatttaacacaatggaaaag
gtttattgtgcagatgtaatatatccaatggcagttgtatcaactgcacaacgtggaatt
cttgtataccagttgatgaatgaaccagcagaatttaaaaaaattgagtcacctcttaaa
taccaacatcggtctatagcaatttgtaaagatgcaaatggtgcccctactggttttgct
ctaggttctgttgaaggtagaatagctatgcaatatattcaacctgcagatccaaaagat
aattttaccttcaagtgccatcgttcagaggttactagtgctaaccaagttcaagatata
tatgcagtaaatgacattgcttttcatccacaacatggaaccctagcaacagcaggatct
gatggcaaatacagtttttgggataaagatgcaagaactaagttaaagacatctgatggt
tgtcctcaaccaatcacagcatgctgttttaattttgatgggagtatattttcttatgct
attggttatgattggacaaagggtcatgagttctataacaccaatttaaaacctgcaatt
tttttacgaaactgtggagatgaactaaaatcaagatcaaaaaaatga
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