KEGG   Hydrocarboniclastica marina: soil367_00195
Entry
soil367_00195     CDS       T06192                                 
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
hmi  Hydrocarboniclastica marina
Pathway
hmi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    soil367_00195 (recC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hmi03400]
    soil367_00195 (recC)
Enzymes [BR:hmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     soil367_00195 (recC)
DNA repair and recombination proteins [BR:hmi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     soil367_00195 (recC)
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C DUF3142
Other DBs
NCBI-ProteinID: QCF24504
UniProt: A0A4P7XDQ8
LinkDB
Position
complement(43641..47159)
AA seq 1172 aa
MPSTDHAPASGLTIVHANHPEDLRELVAGLIQRNPLRPLENEVFLVQSNGMAQWLKLKLA
QDDACGIAAALDMQMPSRFLWSAYRAVLGKGTVPDHSPFDREPLTWRLLRLLPACLDDPL
FEPLGHFLAVDDDLRKRYQLAERLADLFDQYQVYRADWLAAWQAGDDELISPRGERHPLG
ADQRWQAALWRRLQSDVGPDLADSSRAEVHRRFLEQVRLLGERPPALPRRLTVFGISSLP
QQILEALDALSRHLAVQIYVHNPCRYYWADIIEERHLLRFERYRHPDKPGLQGLDADQLH
SRTNPLLAAWGKQGRDYIGLLYDYDNATSSHASIDLFRDRNDAAQPHLLHQVQQKILDLE
PLPPADQPEKREPVAAGDRSVAFRLAHSRQREVEILQDHLLALLDETPAGVADKQLAPRD
IIVMVPDIAAYAPHIEAVFGRLAPDDSRYIPYSIGDRSERSSNPILAALESLLTLPESRF
TVSDVLGLLDVAAFRATFGLSQEDMPALHRWIEQSGIRWGLHSRQREHLDLPPGLDQNSW
RFGLKRMLLGYAGGSGGAWHEIEPFDEIGGLDATVAGKLYRVVETLEDYWQRLRQTHSPD
EWSIHLRDLVLECLQPSDDDALVLEQFQEVLRQWQQHCDEAGLTENLPLSVVRDALLARF
EEVSLSQRFLAGRINFGTLMPMRAIPFEVVCLLGMNDGEYPRQRPPLDFDLMAEQYRPGD
RSRQEDDRYLFLEALLSARRGFYLSWLGRNARDNSERTPSVLVGQLRDYLDAGWQMTDNA
GENVPVSQGLTLLHPLQPFSRVYFESMGGHDPYFTYAREWAGLHTVRTEALVGQARADTP
LILPPQPLDAALSLDQLHRFMRYPADAFFNQRLNVWFGRSEEPTPEDEPFVLDGLARFSY
RSEIFEQCRKADIAEQEDLLSEGLERLRRAGRLPMGAARANVSEQIEAEVRETLAHWNRV
MARWPASADPLELALDGLILPELPDQQVIALNDWVDHLYGDGNGNLACILAQPAQAWNGR
QGKQSQLKYHYFIALWLRHVALAAAGQPITSVLVSTDGAHTLPVVEQAAAVQSLQRLLTA
WYTAQQQCLPLGMGTAMALLRDEPEERTDLQRYLSAYAGADFGPPGDLGASPALERCWPD
LNAAWQAGLPAWAEQVYGDFFASVQQREREHE
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgccgagcacggaccacgcaccggcttccgggctgaccattgtccacgccaaccatccg
gaagacctgagagagctggtggcggggctgatccaacgtaacccgttgcgcccccttgag
aacgaagttttcctggtccagagcaatggcatggcccaatggctgaagctcaaactggcc
caggacgacgcctgtggtattgccgcggcgctcgacatgcagatgccgtcccgcttcctc
tggtcggcctaccgtgcggtgctgggcaaagggacggtgcccgaccattcgccttttgat
cgtgagcccctgacctggcgcctgctgcgactgctgcccgcgtgcctggatgacccgctg
ttcgagcccctgggccactttctcgccgtggatgacgatctgcgcaagcgctaccagctg
gctgaacgactggccgacctgttcgaccagtatcaggtttaccgggcggactggctggcc
gcatggcaggcaggcgacgacgaactgatcagcccacgcggggaaagacaccccctgggc
gcggaccagcgctggcaggcagcactctggcgacgccttcaaagcgacgtcggcccggac
cttgccgatagctcgcgggcggaagtccatcgtcgctttctcgaacaggtgcgcctgctc
ggcgaacgcccacccgcattgccacgccgcctgaccgtattcggcatttcctcgctgccc
cagcagatcctggaagccctcgacgcactgtcccgtcatcttgctgttcagatctatgtg
cacaacccctgccgctactactgggcagacattatcgaggagcgccacctgctccggttc
gaacgctaccgtcatccggacaaaccgggcctgcagggcctcgacgctgaccagttacat
agccgcacgaaccctctgttggcggcctggggcaagcagggacgggactatatcgggctg
ctatacgactacgacaatgccaccagcagccacgccagcattgaccttttccgagaccgc
aacgacgcagcgcagccacaccttctccaccaggttcagcagaaaattctcgacctcgag
cccctgccgcctgcggatcagcccgaaaagcgcgaaccggtggctgcaggggaccgctcg
gtcgccttccggctggcccacagccggcaaagggaagtcgagatactgcaggaccatttg
ctggcgctgctggacgagacacctgcaggtgtggccgacaaacagctggcgccgcgggac
atcatcgtcatggtgcccgacattgcggcctacgcgccgcatatagaagctgttttcggc
cgattggcgccggacgattcccgttatatcccctacagcatcggcgaccgcagtgagcgc
tcgagcaacccgattctggccgcccttgagagcctgctgactctgcctgaatcccgtttc
accgtcagcgacgtgttggggctactcgatgttgccgcgttcagggcaacctttggcctc
agccaggaggacatgccggcccttcaccgctggatcgaacaaagcggcattcgctggggc
ctgcacagccgccagcgcgaacatctggacctgccgcccggcctggaccagaacagctgg
cgcttcgggctcaagcgtatgctgctgggttacgccggggggagcggcggcgcctggcat
gagattgaaccctttgacgagatcggcgggctggacgcaactgtcgccggcaagctctac
cgcgtcgttgaaactctggaagactactggcaacgattgcggcaaacccattccccggat
gagtggagcatccacctgcgtgaccttgtccttgagtgtctccagcccagcgatgatgac
gccctggttctggagcagttccaggaagtgctgaggcagtggcaacaacattgcgacgag
gccggactcactgaaaacctgccactgtcggtcgtccgcgatgcgctcctggctcgcttt
gaagaagtcagcctttcccagcgttttcttgccgggcggatcaacttcggtacgttgatg
cccatgcgcgctattcctttcgaggtggtctgtctcctcggcatgaacgacggtgagtat
ccacgccagcgcccgccgctggactttgacctcatggccgagcagtaccgtccgggcgac
cgctcgcgccaggaggacgaccgctacctgtttcttgaggccctgctgtcagcacgccgg
ggattttatctgtcctggctgggccgcaatgcccgcgacaacagcgaacgcaccccgtcc
gtcctggttggccagttacgcgactacctcgacgccggctggcaaatgacagataacgct
ggcgaaaatgttccggtcagtcaggggctgaccctgttgcacccgttgcagcctttcagc
cgggtctacttcgagtccatggggggccatgacccctatttcacctatgcccgggaatgg
gccggcctgcataccgtgcggaccgaggctctggtaggacaggcccgtgccgacaccccc
ctgatcctgccgccgcaaccactcgacgctgccctgagcctggatcaactgcaccggttc
atgcgctacccggcggatgccttcttcaaccagcgcctcaatgtctggtttggacgcagt
gaagagcctacccccgaagacgagcccttcgtcctggatgggcttgcccggttcagctac
cgcagcgagatcttcgagcagtgccgcaaggccgatatcgcagagcaggaagacctgttg
tccgaggggctcgagcgcctcaggcgagcggggcgcttgcccatgggcgccgccagggct
aacgtcagcgagcagatcgaggcggaggtccgcgagaccctggcccactggaaccgtgtg
atggcacgatggcccgcttctgcagacccgcttgagctggcactcgatggtctgatactg
ccggaactcccagaccagcaggtcatagccctgaatgactgggttgaccacctttacggc
gacggcaacggcaatctcgcctgcattctggcgcagccggcgcaggcctggaatggcagg
cagggcaagcaatcccaactcaaataccactactttatcgccctctggctacggcatgtg
gccctagccgccgcgggtcagccgataacgagcgtcctcgtctccaccgacggtgcccat
acgctgcctgtcgttgaacaggcagcagccgttcaaagcctgcaacggctgcttacggcc
tggtacaccgctcagcagcagtgtctacccctgggcatgggcaccgccatggcgctgctt
cgggatgagcctgaggagcggacggacctccagcgttacctcagcgcttacgcgggcgct
gacttcggcccgcccggcgaccttggcgccagtccagcgctggagcgctgctggcctgac
ctgaacgccgcctggcaggcggggctgccggcatgggcagaacaggtttacggtgatttt
ttcgccagtgtgcagcagcgggagcgagagcatgagtga

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