Hydrocarboniclastica marina: soil367_00195
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Entry
soil367_00195 CDS
T06192
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
soil367_00195 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmi03400
]
soil367_00195 (recC)
Enzymes [BR:
hmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
soil367_00195 (recC)
DNA repair and recombination proteins [BR:
hmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
soil367_00195 (recC)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF3142
Motif
Other DBs
NCBI-ProteinID:
QCF24504
UniProt:
A0A4P7XDQ8
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All DBs
Position
complement(43641..47159)
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AA seq
1172 aa
AA seq
DB search
MPSTDHAPASGLTIVHANHPEDLRELVAGLIQRNPLRPLENEVFLVQSNGMAQWLKLKLA
QDDACGIAAALDMQMPSRFLWSAYRAVLGKGTVPDHSPFDREPLTWRLLRLLPACLDDPL
FEPLGHFLAVDDDLRKRYQLAERLADLFDQYQVYRADWLAAWQAGDDELISPRGERHPLG
ADQRWQAALWRRLQSDVGPDLADSSRAEVHRRFLEQVRLLGERPPALPRRLTVFGISSLP
QQILEALDALSRHLAVQIYVHNPCRYYWADIIEERHLLRFERYRHPDKPGLQGLDADQLH
SRTNPLLAAWGKQGRDYIGLLYDYDNATSSHASIDLFRDRNDAAQPHLLHQVQQKILDLE
PLPPADQPEKREPVAAGDRSVAFRLAHSRQREVEILQDHLLALLDETPAGVADKQLAPRD
IIVMVPDIAAYAPHIEAVFGRLAPDDSRYIPYSIGDRSERSSNPILAALESLLTLPESRF
TVSDVLGLLDVAAFRATFGLSQEDMPALHRWIEQSGIRWGLHSRQREHLDLPPGLDQNSW
RFGLKRMLLGYAGGSGGAWHEIEPFDEIGGLDATVAGKLYRVVETLEDYWQRLRQTHSPD
EWSIHLRDLVLECLQPSDDDALVLEQFQEVLRQWQQHCDEAGLTENLPLSVVRDALLARF
EEVSLSQRFLAGRINFGTLMPMRAIPFEVVCLLGMNDGEYPRQRPPLDFDLMAEQYRPGD
RSRQEDDRYLFLEALLSARRGFYLSWLGRNARDNSERTPSVLVGQLRDYLDAGWQMTDNA
GENVPVSQGLTLLHPLQPFSRVYFESMGGHDPYFTYAREWAGLHTVRTEALVGQARADTP
LILPPQPLDAALSLDQLHRFMRYPADAFFNQRLNVWFGRSEEPTPEDEPFVLDGLARFSY
RSEIFEQCRKADIAEQEDLLSEGLERLRRAGRLPMGAARANVSEQIEAEVRETLAHWNRV
MARWPASADPLELALDGLILPELPDQQVIALNDWVDHLYGDGNGNLACILAQPAQAWNGR
QGKQSQLKYHYFIALWLRHVALAAAGQPITSVLVSTDGAHTLPVVEQAAAVQSLQRLLTA
WYTAQQQCLPLGMGTAMALLRDEPEERTDLQRYLSAYAGADFGPPGDLGASPALERCWPD
LNAAWQAGLPAWAEQVYGDFFASVQQREREHE
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcacggaccacgcaccggcttccgggctgaccattgtccacgccaaccatccg
gaagacctgagagagctggtggcggggctgatccaacgtaacccgttgcgcccccttgag
aacgaagttttcctggtccagagcaatggcatggcccaatggctgaagctcaaactggcc
caggacgacgcctgtggtattgccgcggcgctcgacatgcagatgccgtcccgcttcctc
tggtcggcctaccgtgcggtgctgggcaaagggacggtgcccgaccattcgccttttgat
cgtgagcccctgacctggcgcctgctgcgactgctgcccgcgtgcctggatgacccgctg
ttcgagcccctgggccactttctcgccgtggatgacgatctgcgcaagcgctaccagctg
gctgaacgactggccgacctgttcgaccagtatcaggtttaccgggcggactggctggcc
gcatggcaggcaggcgacgacgaactgatcagcccacgcggggaaagacaccccctgggc
gcggaccagcgctggcaggcagcactctggcgacgccttcaaagcgacgtcggcccggac
cttgccgatagctcgcgggcggaagtccatcgtcgctttctcgaacaggtgcgcctgctc
ggcgaacgcccacccgcattgccacgccgcctgaccgtattcggcatttcctcgctgccc
cagcagatcctggaagccctcgacgcactgtcccgtcatcttgctgttcagatctatgtg
cacaacccctgccgctactactgggcagacattatcgaggagcgccacctgctccggttc
gaacgctaccgtcatccggacaaaccgggcctgcagggcctcgacgctgaccagttacat
agccgcacgaaccctctgttggcggcctggggcaagcagggacgggactatatcgggctg
ctatacgactacgacaatgccaccagcagccacgccagcattgaccttttccgagaccgc
aacgacgcagcgcagccacaccttctccaccaggttcagcagaaaattctcgacctcgag
cccctgccgcctgcggatcagcccgaaaagcgcgaaccggtggctgcaggggaccgctcg
gtcgccttccggctggcccacagccggcaaagggaagtcgagatactgcaggaccatttg
ctggcgctgctggacgagacacctgcaggtgtggccgacaaacagctggcgccgcgggac
atcatcgtcatggtgcccgacattgcggcctacgcgccgcatatagaagctgttttcggc
cgattggcgccggacgattcccgttatatcccctacagcatcggcgaccgcagtgagcgc
tcgagcaacccgattctggccgcccttgagagcctgctgactctgcctgaatcccgtttc
accgtcagcgacgtgttggggctactcgatgttgccgcgttcagggcaacctttggcctc
agccaggaggacatgccggcccttcaccgctggatcgaacaaagcggcattcgctggggc
ctgcacagccgccagcgcgaacatctggacctgccgcccggcctggaccagaacagctgg
cgcttcgggctcaagcgtatgctgctgggttacgccggggggagcggcggcgcctggcat
gagattgaaccctttgacgagatcggcgggctggacgcaactgtcgccggcaagctctac
cgcgtcgttgaaactctggaagactactggcaacgattgcggcaaacccattccccggat
gagtggagcatccacctgcgtgaccttgtccttgagtgtctccagcccagcgatgatgac
gccctggttctggagcagttccaggaagtgctgaggcagtggcaacaacattgcgacgag
gccggactcactgaaaacctgccactgtcggtcgtccgcgatgcgctcctggctcgcttt
gaagaagtcagcctttcccagcgttttcttgccgggcggatcaacttcggtacgttgatg
cccatgcgcgctattcctttcgaggtggtctgtctcctcggcatgaacgacggtgagtat
ccacgccagcgcccgccgctggactttgacctcatggccgagcagtaccgtccgggcgac
cgctcgcgccaggaggacgaccgctacctgtttcttgaggccctgctgtcagcacgccgg
ggattttatctgtcctggctgggccgcaatgcccgcgacaacagcgaacgcaccccgtcc
gtcctggttggccagttacgcgactacctcgacgccggctggcaaatgacagataacgct
ggcgaaaatgttccggtcagtcaggggctgaccctgttgcacccgttgcagcctttcagc
cgggtctacttcgagtccatggggggccatgacccctatttcacctatgcccgggaatgg
gccggcctgcataccgtgcggaccgaggctctggtaggacaggcccgtgccgacaccccc
ctgatcctgccgccgcaaccactcgacgctgccctgagcctggatcaactgcaccggttc
atgcgctacccggcggatgccttcttcaaccagcgcctcaatgtctggtttggacgcagt
gaagagcctacccccgaagacgagcccttcgtcctggatgggcttgcccggttcagctac
cgcagcgagatcttcgagcagtgccgcaaggccgatatcgcagagcaggaagacctgttg
tccgaggggctcgagcgcctcaggcgagcggggcgcttgcccatgggcgccgccagggct
aacgtcagcgagcagatcgaggcggaggtccgcgagaccctggcccactggaaccgtgtg
atggcacgatggcccgcttctgcagacccgcttgagctggcactcgatggtctgatactg
ccggaactcccagaccagcaggtcatagccctgaatgactgggttgaccacctttacggc
gacggcaacggcaatctcgcctgcattctggcgcagccggcgcaggcctggaatggcagg
cagggcaagcaatcccaactcaaataccactactttatcgccctctggctacggcatgtg
gccctagccgccgcgggtcagccgataacgagcgtcctcgtctccaccgacggtgcccat
acgctgcctgtcgttgaacaggcagcagccgttcaaagcctgcaacggctgcttacggcc
tggtacaccgctcagcagcagtgtctacccctgggcatgggcaccgccatggcgctgctt
cgggatgagcctgaggagcggacggacctccagcgttacctcagcgcttacgcgggcgct
gacttcggcccgcccggcgaccttggcgccagtccagcgctggagcgctgctggcctgac
ctgaacgccgcctggcaggcggggctgccggcatgggcagaacaggtttacggtgatttt
ttcgccagtgtgcagcagcgggagcgagagcatgagtga
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