Hydrocarboniclastica marina: soil367_03700
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Entry
soil367_03700 CDS
T06192
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmi03009
]
soil367_03700
Enzymes [BR:
hmi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
soil367_03700
Ribosome biogenesis [BR:
hmi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
soil367_03700
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QCF27806
UniProt:
A0A4P7XKP4
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All DBs
Position
810574..811515
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AA seq
313 aa
AA seq
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MQVPAELSEKRLDQAVADLLPEHSRARIQGWIKNEQLRVNGKACKPREKVRMGDSIDIDA
IVSGEARWEAQQIELDILYEDEHLIVLNKPAGLVVHPAAGHASGTLVNALLNHAPELDHI
PRAGVVHRLDKDTSGVMVVARSLVAHTYLVNQLQARTMGREYAAVVVGAMTGGGVVDAPI
GRHPHQRKKMAVVPGGKPAITHYRLIRRYSGHTHVRCKLESGRTHQIRVHMASIRHPVVG
DPVYAGRLRVPAGATEKLRATLGGFSRQALHARILTLLHPETGAEVSWEAPLPQDFVELV
NALDESEAAKGTL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttccggcagaactcagcgaaaagcgcttagaccaggcagtcgccgatttgttg
cctgagcattcccgtgcccgcattcagggctggatcaaaaacgagcagttgcgcgtcaat
ggcaaggcgtgcaagccgcgcgaaaaagtgcgcatgggcgattcgatcgacattgacgcg
atcgtctcaggcgaggcccgctgggaggcacagcagatcgagcttgatattctttatgag
gatgagcatctcatcgtcctcaataagcctgcagggctcgtggtccaccccgccgccggg
cacgcgagcggtacgctcgtcaatgcgttgctgaatcacgccccggagctggaccacatc
ccccgcgcgggcgtcgtgcaccggctcgacaaggatacatcgggggtgatggtggtggca
cggagcctggtggcacatacctatctggtcaatcagttgcaggcacgcaccatggggcgg
gagtacgcagcggtggttgtcggcgccatgaccggcggcggcgtggtcgatgcgcccatt
ggtcggcacccgcaccagcgtaaaaaaatggccgttgtcccaggtggcaagccagccata
acgcattaccggctgatcaggcgctatagcgggcacactcacgtgcgatgcaaactggag
agcggcagaacccatcagatccgcgtgcacatggccagtatccggcacccggtggtaggc
gaccccgtttacgccgggcggctccgtgttccagcgggcgccactgaaaagctacgggcc
actctgggtggtttttcgcggcaggccctgcatgcccgtatcttgaccttgctgcatccg
gaaacgggggcggaagtgtcctgggaggccccgctgccgcaggatttcgtcgagcttgtt
aacgccctggatgaatcggaagcggcgaagggcaccctctaa
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