Hydrocarboniclastica marina: soil367_04685
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Entry
soil367_04685 CDS
T06192
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
soil367_04685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmi03400
]
soil367_04685
Enzymes [BR:
hmi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
soil367_04685
DNA repair and recombination proteins [BR:
hmi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
soil367_04685
Prokaryotic type
soil367_04685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCF25283
UniProt:
A0A4P7XFC6
LinkDB
All DBs
Position
1020332..1021132
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AA seq
266 aa
AA seq
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MARHPIEVLKDALAVGSGWRERLEAEFQQDYLMRLSEFLASEELAGKSIFPPRQLCFNAL
NATPFDHVGVVILGQDPYHGAGQAHGLCFSVRPGVKIPPSLRNMFKELKSELGIDPPDHG
CLQPWANQGVLLLNSVLTVEEGSAGSHQGRGWERFTDRVIGALNAEREGVVFMLWGSYAQ
KKGQFIDRRRHLVLESPHPSPLSASRGFLGNGHFAKANGWLDANGKPEIDWQLPDKATLL
TEYGISESEITGLGPANAAAGRACYP
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcacccaatcgaagttctaaaggatgcccttgccgtgggctcgggttggcgg
gagcgcctggaagcggagtttcagcaggactatcttatgcgcctgtctgagttccttgcg
tcggaagaactcgccggtaagtcgatctttccgccccggcagctctgcttcaacgccctc
aatgcaacgcctttcgaccacgtcggcgtcgttattctcggccaggatccctaccatggt
gccggccaggcgcacggattgtgcttcagtgtgcgcccgggcgtaaaaatcccgccctcg
ttacgcaacatgttcaaagagctcaagtctgagctcggtatagacccgcccgaccacggc
tgcctccagccctgggcaaatcagggcgtgctgctgctgaacagtgtgctcaccgttgag
gaaggctccgccggctcacatcagggcagaggttgggagcggttcactgaccgcgtaata
ggcgctctcaatgccgagcgggagggggtagtgtttatgctttgggggagctacgcgcag
aagaaagggcagttcatcgaccgccgccgtcacttggtgcttgagagtccccacccatcg
cctttgtcggccagtcgtggcttcctgggcaacggccacttcgccaaggcgaacggctgg
ctggacgccaatggaaagcctgagattgactggcaactacctgacaaagctacccttctg
acggaatatggtatctcggagagcgagatcacagggctcgggccagccaatgcggcggcc
gggcgagcttgctacccatga
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