Hydrocarboniclastica marina: soil367_09205
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Entry
soil367_09205 CDS
T06192
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
soil367_09205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmi03400
]
soil367_09205
Enzymes [BR:
hmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
soil367_09205
DNA repair and recombination proteins [BR:
hmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
soil367_09205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QCF26092
UniProt:
A0A4P7XIG2
LinkDB
All DBs
Position
2045004..2045822
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AA seq
272 aa
AA seq
DB search
MRVVTFNVNGIRARLHQLRQLIAEYNPDVIGLQETKVPDDQFPREEVEQLGYHVSFHGQK
SHYGVALMSREKPLSIQCGYEHDEDDAQKRFIVGEFACGDGKITIANGYFPQGESRDHPI
KFPAKAKFYGDLIYWLERNNREDSPLILMGDLNISPTDQDIGIGEDNAKRWLRTGKCSFL
PEEREWLRHVTDQGLMDVYRKLHPEVSDRFSWFDYRSRGFEREPKRGLRIDLILANAMLA
DKASASGIAYDIRGMERPSDHCPVWADFEVSR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagtcactttcaacgtaaacggaattcgcgcccggcttcatcaactccgccag
cttatagcggagtacaatcccgacgtcataggcctgcaggaaaccaaagtcccggacgac
cagtttccgcgcgaggaggtggaacaactgggctatcacgtcagcttccacgggcagaag
tcacactatggcgttgcactcatgtcccgggagaagcccctctcgatccaatgcggatac
gaacatgacgaagatgacgcccagaagcgttttatcgtaggtgagtttgcctgcggtgac
ggcaagatcaccatcgccaacggttactttccgcaaggcgaaagccgcgatcaccccatc
aagtttccagcgaaggccaagttctacggagatctcatctactggctggaacggaacaat
cgcgaggattcgccactgatcctcatgggcgatctgaatatttcgccaacggatcaggat
attggtattggtgaagataatgccaagcgctggctgcgcaccggcaagtgcagtttcttg
cctgaggagcgcgaatggcttcggcatgtgacggaccagggattgatggatgtataccgg
aaactgcacccggaggtcagcgaccggttcagctggttcgattaccgtagcagagggttt
gagagagagcccaagcgaggccttcggattgatctgattctggccaacgcaatgctggcc
gataaggcgagtgcgagtggtatcgcctacgacatccgtggcatggagcgcccgtcggac
cattgccctgtctgggcagatttcgaggtctcacggtag
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