Haematobacter massiliensis: HmaOT1_03845
Help
Entry
HmaOT1_03845 CDS
T05861
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hml
Haematobacter massiliensis
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hml03009
]
HmaOT1_03845 (rimO)
Enzymes [BR:
hml01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HmaOT1_03845 (rimO)
Ribosome biogenesis [BR:
hml03009
]
Prokaryotic type
ribosomal protein modification factors
HmaOT1_03845 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QBJ25262
UniProt:
A0A4P6RZ54
LinkDB
All DBs
Position
complement(446114..447499)
Genome browser
AA seq
461 aa
AA seq
DB search
MVLNPPNLRPDLAPAPTFDAGVRRTGQPSIGIVSLGCPKALVDSERILTRLRAEGYQISP
DYQGADAVIVNTCGFLDSAKAESLEAIGEALTENGRVIVTGCLGAEPEFITGTHPSVLAV
TGPHQYEQVLDAVHRAVPPAPDPFVDLLPASGIKLTPRHFSYLKISEGCNHKCKFCIIPD
MRGKLQSRPAHAVLREAEKLVEAGVKELLVISQDTSAYGVDRKHDLSPWKGGDVRAHITD
LARELGGLGAWVRLHYVYPYPHVRQLIPLMAEGLVLPYLDIPFQHAHPDVLRRMARPAAA
ARTLDEIAAWRSDCPELSLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGCFKYENVAG
ARSNDLPDHVPEDVKQDRWERFMEKAQAISEARLADRIGTRQEVIVDDVDEDGATCRTRF
DAPEIDGNLFIDTGFENLKPGDIVTVEVDEAGEYDLWGSLT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaacccgcccaacctccgccccgatcttgcccctgcgccgactttcgacgcg
ggcgtccgtcgtacgggacagccgtcgatcgggatcgtatccctcggctgccccaaggct
ctcgtggacagcgagcggatcctgacgcggctccgcgcggaaggctatcagatctcgccc
gattatcagggcgccgatgccgtgatcgtcaacacctgcggctttctcgacagcgccaag
gcggagagcctcgaagccataggcgaggcgctgacagagaacgggcgggtgatcgtcacg
gggtgtcttggcgcggaaccggaattcatcaccggaacccatccctcggtgctcgccgtc
acgggaccgcatcagtatgaacaggtgctggacgccgtgcacagggccgtgccgcccgcg
ccagacccgttcgtggatctgctgcccgcctccggcatcaaactgacaccgcgccatttc
agctacctgaagatttcggaaggctgcaatcacaagtgcaagttctgcatcatccccgac
atgcggggcaagttgcagagccgccccgcccatgcagtgctgcgcgaggcggagaagctg
gtggaagcgggggtcaaggaactcctcgtcatcagtcaggacacgtcagcctatggcgtg
gatcgcaagcacgatctctccccctggaagggcggggatgttcgcgcgcatatcaccgat
ctggcccgcgaactcggggggctcggcgcgtgggtgaggctccactacgtctatccctac
ccgcatgtccgccagcttatcccgctgatggcggaggggctggtgctgccttatctggat
atccccttccagcacgcgcacccggatgtcctgcgccgcatggcgcgccccgccgccgcc
gcgcggacgctggatgagatcgctgcctggcggagcgattgtcccgaactatccctgcgc
tccaccttcatcgtcggttatcccggcgagacggaagcagagtttcagaccctgctcgac
tggctggacgaggcccagctcgatcgcgtcggttgcttcaaatacgaaaacgtcgccggg
gcgcgctccaacgacttgccggatcatgtgccggaagacgtgaagcaggaccgttgggag
cgtttcatggagaaggctcaggccatttccgaggcgcgccttgcggaccgcataggtacg
cgccaagaggtgatcgtggacgacgtggatgaggacggggcaacctgccgaacccgcttt
gatgcaccggaaatcgacgggaacctgttcatcgacacaggcttcgagaacctgaagccg
ggtgacatcgttaccgtcgaggtggatgaggcgggagaatacgatctctggggatcgctg
acgtaa
DBGET
integrated database retrieval system
