Halobacillus mangrovi: HM131_17760
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Entry
HM131_17760 CDS
T04799
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hmn
Halobacillus mangrovi
Brite
KEGG Orthology (KO) [BR:
hmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmn03009
]
HM131_17760
Enzymes [BR:
hmn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HM131_17760
Ribosome biogenesis [BR:
hmn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HM131_17760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Met_10
Methyltransf_25
PrmA
Methyltransf_15
MTS
Cons_hypoth95
Methyltransf_11
RrnaAD
N6_N4_Mtase
UPF0020
Methyltransf_23
PCMT
Methyltransf_32
CMAS
DUF1647
TPMT
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ARI78569
UniProt:
A0A1W5ZZ85
LinkDB
All DBs
Position
complement(3542488..3543864)
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AA seq
458 aa
AA seq
DB search
MAKPKPPVQKNQTIELTFEDLTHEGNGVGKVDGYPLFVPYGLPGEQATVKVVKVKKNFGF
GKLLEVKEASDDRVEPPCDVFYQCGGCQLQHMSYKMQLQMKHKQVKDAMKKIGHLEHVPV
HDTIGMDDPWRYRNKVQIPVGQKEDGELMTGFYQKRSHNIIDMDTCLIQDEMNDRMVEAV
RRIASKLGISAYDEQTHRGTIRHIMVRTGQNTKDIMVVIVTKTKKLPHKKKLIDEIRDAY
PNVKSIVHNVNHAKTNVILGKETNVIYGDEYIYDTIGDIKFMISPKSFYQVNPTQTKKLY
DQALEYADLRGGETVIDAYCGIGTISLFLAQKAKKVYGVEIVPEAVTDAKKNGRLNKMEN
AEFYVGQAEELMPWWRNQGLRPDVIVVDPPRKGCDEELLKAMLDMEPERIVYVSCNPSTL
ARDLRVLEDGGYETKQVQPVDMFPQTSHVECVTWLEKY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccaaagccgcctgtacaaaaaaaccaaacgattgaactgacatttgaagat
ctgacccacgaaggcaatggggtagggaaagttgatggctatccgcttttcgtaccgtat
ggccttcctggtgaacaagcaaccgtcaaagtcgtcaaagtgaagaaaaacttcggcttt
ggcaaattgctagaagtaaaagaggctagtgacgaccgtgtggagccgccttgtgacgtg
ttttatcaatgtggaggctgtcagctgcagcacatgagttataaaatgcagcttcagatg
aagcacaagcaagtaaaagatgcgatgaaaaagatcggccatcttgaacacgtaccggta
cacgatacgattggtatggatgatccttggcgctaccggaacaaggttcagattcctgtc
gggcaaaaagaagacggtgaactgatgaccggcttttaccagaaacgcagccacaacatc
attgatatggacacttgtttgatacaggatgaaatgaatgaccgtatggtggaagcggtt
cgacgtatcgcttcaaaacttggtatatcagcgtatgatgaacagacacatcgtggcacg
atacgacatattatggtgcgcacaggtcaaaatacgaaggacatcatggttgttatcgtc
acgaaaacgaaaaaactcccgcataaaaagaagcttattgatgagattcgcgatgcctat
ccgaacgtgaaatcgatcgtccataacgtcaatcatgctaagaccaatgtcatcttagga
aaagaaacgaatgtcatttacggagatgagtatatttacgataccatcggtgatatcaaa
tttatgatttctcctaaatcgttctaccaggtcaacccgacccagacaaaaaagctttat
gatcaagcattggagtacgctgaccttagagggggcgaaacagttattgacgcgtattgc
ggtatcggcaccatatctcttttcctggctcaaaaagcgaagaaagtttatggagtggag
atcgtcccagaagccgttaccgatgcaaaaaagaatggccggctgaacaaaatggaaaac
gctgaattttatgtcggacaagcagaagaacttatgccatggtggcgcaaccagggtctg
cgtccagacgttatcgttgttgacccaccacgaaaaggctgtgatgaagagctcttgaaa
gcgatgctcgacatggaaccggagcgtatcgtctatgtatcgtgtaatccatcgacgctc
gcgcgtgatttaagagtgcttgaagatggaggatacgagacgaaacaggttcagcctgtt
gatatgttcccacagacgagccacgtggagtgtgtgacgtggttagagaaatactaa
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