Hippea maritima: Hipma_0658
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Entry
Hipma_0658 CDS
T01456
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hmr
Hippea maritima
Pathway
hmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Hipma_0658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmr03400
]
Hipma_0658
Enzymes [BR:
hmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Hipma_0658
DNA repair and recombination proteins [BR:
hmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hipma_0658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
HHH_5
PIF1
AAA_11
5_3_exonuc
UvrD-helicase
Viral_helicase1
Mg_chelatase
AAA_18
AAA_22
AAA
DUF5694
RsgA_GTPase
AAA_5
AAA_16
Ntox35
Motif
Other DBs
NCBI-ProteinID:
AEA33628
UniProt:
F2LV44
LinkDB
All DBs
Position
656307..658193
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AA seq
628 aa
AA seq
DB search
MSGKKERLQYKDYFRHNAKIIRWCTLEHCKFRAEERNRAIRFIYIRGMGINPQRYSKAKK
NCVRKMQTKSIKGTIASVIYLNDDNAFSILSVETKQGKIKAKGVFPDLKSIGKEKAKELE
CELVGSWKKDLRWGYEFVFSNGRILNSDGLFFFLTKIVKGIGEKLARELINHYGEQQLTY
ILDNEPDTLTEFKGIKEKKLAKILESWNKYRQLKQLSEFFTRYGVNATGNLILRIYNTFK
DRTDFDLMLELSRNPYILTEVRGIGFKTADKIALQMGVAEDSPERVSALLDYILASESSD
NGHTFLTYNQIYEKASEYIYKEDDNKGIEDIKPIIDTVIRSNEEKYYYDTKKVAFKGHRV
KEDYIETEMRKRLSRRFFAVLSEQEAEEFIRKQEQRLGFRFSDEQKKAIKTITTTGTNTF
ILCGYAGTGKSTISKVILDFYSQFIPKEKITCCAFTGMASKRIREVTGYKSSTIHSLLKY
KGDSFEYNQNNPLPYDVILLDEASMVNLDIFYHLLRAVKRDAVFIMVGDDAQLPPIGAGN
VFNDLLHKDWIPKVKLTKIYRQSSDSVITYFASYIRQGRVPQGYIGRYRDWYFKEMEIKN
YFQLKKTLSNKELAELRESYLYPFSLAV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggcaaaaaggaaagattgcaatacaaagactatttcaggcataacgctaaaatc
attagatggtgtacactggaacattgcaagtttagagcagaggaaagaaatagggctata
cggttcatatacattagaggaatgggaatcaatcctcaacgctattctaaagcaaagaaa
aactgcgtaaggaaaatgcaaactaagtccattaaaggcactatagccagcgtcatatat
ttaaacgacgacaacgccttctccatcctctccgttgagaccaagcagggcaagataaaa
gccaagggcgtattcccagacctcaaatccatcggcaaggagaaggctaaagagcttgag
tgcgagcttgtaggttcctggaaaaaagatctcagatggggctatgagtttgtcttctct
aacggcagaatcctcaacagcgacggcttgttcttcttcctgacaaagatagtaaagggc
ataggcgagaagttggcaagggagcttatcaaccactacggcgagcagcagctaacctac
atccttgacaacgagcccgacacactcaccgagttcaaaggcataaaagagaaaaagcta
gccaagatacttgagtcttggaacaaatataggcagttaaagcagttgagcgagttcttt
acccgctacggcgtcaatgcaacaggcaatcttatcctacgcatatataacacctttaaa
gatagaacagattttgacttaatgcttgagctctcccgcaacccctacatccttaccgaa
gtcagaggcataggctttaagactgccgataagatagctctccagatgggtgttgccgag
gacagcccggagagagttagcgccttgcttgactatatattggcttccgagtccagcgac
aatggacacacgttcttaacctacaaccagatctacgagaaagccagcgaatacatatac
aaagaagacgacaataagggcattgaggacatcaagcccataatagatacagttatccgc
tccaatgaagaaaagtattattacgacactaaaaaggtagcctttaaagggcatagggta
aaggaagactacattgagaccgagatgagaaaaaggctatcccgcaggttctttgcggtt
ctatcagaacaggaggctgaggagtttattagaaagcaggagcagaggttaggctttagg
ttttctgatgaacagaaaaaggcaattaagacaattaccacaacgggcacaaacaccttt
atcttatgcggttacgctggaacgggtaagtctacaatatcaaaagtaattcttgacttt
tacagtcaatttataccaaaggagaaaataacctgctgtgcctttacgggtatggcttca
aagagaattagagaggtaacaggttataaatcttcgactatacactccttgcttaaatac
aagggagatagtttcgagtacaaccaaaacaaccctctaccttatgacgtcatcttgctt
gatgaagcaagtatggtgaacttggatatattctaccacctattgagagcagtcaagaga
gatgccgtcttcattatggtgggagacgatgctcagcttccgcctatcggtgccggcaat
gttttcaacgacttacttcacaaagactggataccaaaggtaaaactcacgaaaatctac
agacagagctctgacagcgtaataacctactttgcaagctacataaggcagggtagggtg
ccgcaggggtatatcggcaggtatagagactggtattttaaggagatggagataaaaaac
tatttccagctaaagaaaaccttatcaaacaaggaacttgcagaattgagagagtcgtat
ttgtatcctttttctttggctgtatag
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