Helicobacter mustelae: HMU13530
Help
Entry
HMU13530 CDS
T01191
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hms
Helicobacter mustelae
Pathway
hms03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMU13530 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hms03400
]
HMU13530 (uvrB)
DNA repair and recombination proteins [BR:
hms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMU13530 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMU13530 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_22
AAA_30
DUF87
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CBG40607
UniProt:
D3UJD2
LinkDB
All DBs
Position
complement(1469074..1471038)
Genome browser
AA seq
654 aa
AA seq
DB search
MFTLHAPYAPAGDQTQAIHKLSTFIKNGNQYQTLIGVTGSGKTFSMANIIARLNMPTLIM
SHNKTLCAQLYSEFKGFFPKNHVEYFISHFDYYQPEAYIPRRDLFIEKDSSINEDLERLR
LSATTSLLAYDDVIVVASVSANYGLGNPEEYLTMIEKVQVGQHTSRDHLLKKLVDMGYSR
NDNFFERGNFAVSGECVDIFPAYNEVEFVRVEFFGDEIERIGIYDSIERREVKRLDSYVI
YAANQFIVSYERQKIALRNIEKELQERLAFFESQDKMIEYSRLKTRTEFDLEMMESSGIC
RGIENYARHLTGKKEGETPYSLLDYFEQKGRPYLVIVDESHVSLPQFGGMYSGDRSRKEV
LVEYGFRLPSALDNRPLKFEEFIHKAPHFLFVSATPAQKELELSGQNVAEQIIRPTGLLD
PLYEVRDSDNQVLDLYDEIKGVVAKKQRVLITTLTKKMAEELSKYYAELGLKIQYMHSEI
DAIERNHLIRSLRLGEFDILVGINLLREGLDLPEVSLIAIMDADKEGFLRSETSLVQTMG
RAARNVEGRVIFYAKKITQSMQRAMEITDYRRKKQMEYNALHQISPKSVQRNLEEELKLE
SSAVLYKDKKAKIPKSERENIIKELNKKMLASAKLLDFEEAARLRDEIARIKSL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccttgcatgcgccctatgctcctgcgggcgatcagacccaggccattcataag
cttagcacctttatcaaaaatggcaaccaataccagactctcattggcgtaacggggagt
ggcaagactttcagcatggcaaatattattgctaggctgaatatgccaacccttatcatg
agccataacaaaacgctttgtgcgcagctttatagtgagttcaagggattttttccaaag
aatcatgtggagtattttatctctcactttgattattaccagccagaggcctatattccg
cgccgggatttgtttatcgaaaaagattctagcatcaatgaggacttagagcgattgcgt
ctttctgccacgacctccctattagcctatgatgatgtgattgtggtggcaagtgtgtcg
gcaaattatgggctaggaaatcctgaggaatatctcaccatgattgaaaaagtgcaagta
ggacagcataccagccgcgatcatctgctcaaaaagcttgtggacatgggctatagtcgc
aatgataatttttttgagcgagggaattttgctgtgagtggagagtgtgtggatatcttc
cccgcatacaatgaagtggaatttgtgagggtagaattttttggtgatgagatcgagcgc
atcgggatctatgatagcatcgagcgcagggaggtaaagagactggattcctatgtgatt
tatgcggcaaatcaattcatcgttagctatgagcgtcaaaaaattgcgctaagaaatatc
gagaaagaattacaagagcgtctggcattttttgagtctcaagataagatgattgagtac
tctaggcttaaaactcgcacagaatttgatttggagatgatggaatctagcggaatctgc
agggggattgaaaattatgccaggcatctcacggggaaaaaagaaggagagacgccctat
tctttgttagattattttgagcaaaagggcaggccttatttggttattgtggatgagtct
catgtctctttgccccaatttggcggaatgtactctggggatcgcagccgcaaggaagta
ctggtagaatatggcttccgactgcccagtgcactagataaccgccccttgaaatttgaa
gaattcatccacaaggcgccgcattttttgtttgtttctgccacacccgcacaaaaggaa
ttagagctcagtgggcaaaatgtggctgaacaaatcattcgcccaacagggctattagat
cctttgtatgaggtacgcgatagtgataatcaagtgctagatctctatgatgagattaag
ggcgtggtggccaaaaagcagcgtgtgctcatcaccactttgaccaaaaaaatggcggag
gaattgagcaaatattatgcggaattgggacttaaaatccagtatatgcacagcgaaatt
gatgctattgagcgcaatcatctcatccgctccctgcgactaggggaatttgatattttg
gtgggcattaatttattgcgtgaggggttggatttgccagaagtaagcctcattgccatc
atggatgcagacaaagagggctttttgcgcagtgagacaagtctagtccaaaccatgggg
cgggcagctaggaatgtggaggggagggtgattttttatgccaaaaaaatcactcaaagc
atgcagagggctatggaaatcacggattatcgtcgcaagaaacaaatggaatacaatgcc
ctgcatcaaatctctcccaaatccgtgcagcgtaatttggaagaagaattgaagctagag
agcagtgctgtgctctacaaagacaaaaaggccaaaattccaaaatctgagagggaaaac
atcatcaaagaactgaataaaaaaatgcttgcttctgcaaagcttctagattttgaagag
gcagcaaggctgcgtgatgaaatcgctagaatcaaaagtctctaa
DBGET
integrated database retrieval system
