Hyphomonas neptunium: HNE_2765
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Entry
HNE_2765 CDS
T00397
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
hne
Hyphomonas neptunium
Pathway
hne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HNE_2765 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_2765 (uvrA)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNE_2765 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNE_2765 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
BCA_ABC_TP_C
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND1
AAA_25
AAA_21
DUF4350
APS_kinase
PDC10_C
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ABI77005
UniProt:
Q0BYJ9
LinkDB
All DBs
Position
2925564..2928542
Genome browser
AA seq
992 aa
AA seq
DB search
MAESPFIRVRGAKEHNLKNVDVDIPRGELVVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLELMQKPDVESIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLWARAGI
PYSPATGLPIESQTVSQMVDRMMELEEGTRLYLLAPMVRGRKGEFRKEFAELLKNGFQRV
KVNGEFHELEDPPKLDKKFKHDIDVVVDRIVVRAGMEQRLAESFETALGLAQGIAVGEYA
DIAPGETEPKRITFSANFACPVSGFSIPEIEPRLFSFNNPFGACPSCDGLGEQLKIDPAL
IVPDKDLDLLNGAIAPWAKSSSPYQTQTLQALSTHYRFDLGKPWNKLPEKVQDIILHGTG
DEEIQFVYDDGMRSYKVKKTFEGVIPNLDRRYRETDSAWVREEISRFQSAAPCPACGGKR
LKPQALAVKIAGLDISDAGEFSIRKAGEWFGKVHKSLTKQQNEIASRILKEINDRLIFLN
DVGLDYLTLNRGSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNERLLETL
KRLRDLGNSVIVVEHDEDAILLADYVIDMGPAAGVHGGEIIASGTPEEVMKNPKSLTADY
LNGTREIAIPKRRPVAKGSRRITLKGATGNNLKNVTASIPLATFTAITGVSGGGKSTLII
ETLYKALARKLNGASDPPSPYESLEGLQHLDKVIDIDQSPIGRTPRSNPATYTGAFGPIR
DWYAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCETCKGKRYN
RETLDVLFKGKSIADVLDMTVEDAAKFFSAMPAIFSKLDTLNQVGLGYIKVGQQATTLSG
GEAQRVKLAKELSKRATGRTLYILDEPTTGLHFEDVKKLLEVLHELVDAGNTVVVIEHNL
DVVKTADWVLDLGPEGGDGGGKLVAEGTPEDIAAITESWTGKFLAETFRRQDERRAARNK
REKAAAKTAAAPAPAPKAKKPAKKTKAGASAK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatcccccttcatccgcgttcgcggcgccaaggaacacaatctgaagaatgtc
gatgtcgacattccgcgcggcgaactggtcgtgatgacgggcctgtcgggctcgggcaaa
tcgtccctcgcgttcgatacgatctatgccgaggggcagcgccgctatgtcgagtcgctg
tcggcctatgcgcgccagtttctggagctgatgcagaagccggacgtggagagcatcgag
ggtctctcacccgccatctcgatcgagcagaaaacgacgagccgtaatccgcgctccacc
gtcggcacggtgaccgagatttatgactatatgcgcctcctctgggcgcgcgctggcatc
ccctattcgcccgccaccggcctgccgatcgaaagccagacggtcagccagatggtcgac
cggatgatggagcttgaggaaggcacgcggctttacctgcttgccccgatggtgcgcggc
cggaagggcgagttccgcaaggaatttgccgaactgctgaagaacggcttccagcgcgtg
aaggtgaatggcgaattccatgagctggaagacccaccgaaactcgacaagaaattcaag
catgacatcgatgtggtggtcgaccggattgtcgtgcgcgcgggcatggagcagcggctg
gcggaaagcttcgagacggcgctcggcctcgcccagggcattgcggtgggcgaatatgcc
gacatcgcgccgggggaaaccgagcccaagcgcatcacgttcagcgccaattttgcctgt
ccggtttccggcttttccattccggaaatcgagccgcggcttttctcgttcaacaatccg
tttggcgcctgcccgtcctgcgatgggctcggcgaacagctgaagatcgacccggccctg
attgttccggacaaggatcttgatctgctgaacggcgcgattgctccgtgggcgaaatct
tcctcgccctaccagacgcagacgctgcaagcgctctcgacgcattaccggtttgatctg
ggcaagccttggaacaagctgccggaaaaggtgcaggacatcatcctgcatggcaccggg
gatgaggaaatccagttcgtctatgatgacgggatgcgcagctacaaggtcaagaagacc
ttcgaaggcgtgatccccaatctcgaccggcgctaccgggaaacggactcggcctgggtg
cgcgaagagatcagccgtttccagtcggccgcgccctgcccggcctgtggcggcaagcgc
ctgaagcctcaggcgctggcggtgaagattgcggggctggatatttccgatgccggcgag
ttttccatccgcaaggcgggcgagtggtttggcaaggtgcacaaatcgctgaccaagcag
cagaacgagattgccagccgcattctgaaagagatcaacgaccggctgatcttcctcaat
gatgtggggctggattatctgaccctcaatcgcggctcgggcacgctgtccggcggcgag
agccagcgcattcgccttgcttcgcagatcggctctggcctcacgggcgtgctctatgtg
ctggatgagccctccatcggcctgcaccagcgggataatgagcggctcctggaaacgctc
aaacgcctgcgcgatctggggaactccgtgatcgtggtggagcatgacgaggacgcgatc
ctgctggccgattatgtgatcgatatggggccggccgccggcgtgcatggcggggagatc
attgcatcgggtacgcctgaagaggtgatgaaaaaccccaaaagtctgacggcggactat
ctcaacggcacgcgcgagattgccattcccaagcgccgccccgtggcgaaaggctcgcgc
cgcatcacgctgaagggcgcgacggggaataacctcaagaatgtcactgcctcgatcccg
ctggccacattcacggccatcacaggcgtgtcgggcgggggcaaatccacgctcatcatc
gagacgctttacaaagcgctggcgcgcaagctgaacggcgcatcagacccgccttcgccg
tatgagagcctggagggcctgcagcatctcgacaaggtgatcgacatcgaccagtctccc
atcgggcgcacgccgcggtccaacccggcaacctataccggcgccttcgggccgatccgc
gactggtatgccggcctgcccgaagccaaggcgcggggctatgcacccggccggttcagc
ttcaacgtcaagggcgggcgctgtgaggcatgccagggcgacggcgtcatcaagatcgag
atgcactttttgccggacgtctatgtcacctgcgagacctgcaagggcaaacgctataac
cgcgagacgctggacgttctcttcaaaggcaagtcgattgccgatgtgctggacatgacc
gtggaggacgcggcgaagtttttctccgcgatgccggcgattttctcaaagctcgacacg
ctgaaccaggtgggccttggctatatcaaggttggccagcaggcgaccacgctttcgggc
ggcgaggcccagcgggtgaagctcgccaaggaactctccaaacgcgcgacgggccgtaca
ctgtatattctcgacgagccgacgaccggcctgcatttcgaggacgtgaagaagctgctg
gaagtgctccatgaactggtcgacgcgggcaacacggtcgtcgtcatcgagcataatctg
gacgtggtgaagaccgccgactgggtgctcgatcttggccctgagggcggcgatggcggc
ggcaagctggtggccgaaggcacgccggaagacatcgccgcgatcaccgaaagctggacg
ggaaaattcctcgccgaaaccttccgccgtcaggacgaacgccgcgcggcccgaaacaag
cgggagaaggcagccgcgaaaacggcggctgcgcccgcccctgccccaaaggccaagaaa
ccggcgaaaaaaacaaaggccggcgccagcgcgaaatag
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