Hyphomonas neptunium: HNE_3549
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Entry
HNE_3549 CDS
T00397
Name
(GenBank) putative exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hne
Hyphomonas neptunium
Pathway
hne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HNE_3549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_3549
Enzymes [BR:
hne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HNE_3549
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HNE_3549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABI78391
UniProt:
Q0BWC3
LinkDB
All DBs
Position
3685413..3686222
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AA seq
269 aa
AA seq
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MTRPIKITTWNINSVRLRAPNVEAFVAAEKPDVVCLQETKCQDAEFPLKAFKDMGLPYLV
IRGQRGGHAGVAIASRLPLEQVDVPDLCRENHARVIAARLPSGLEVHNIYLPAGGDTPDP
DANDKFAHKLDFLDRLGPGYKKLKKGVKRVLVGDLNVAPHENDVWSHKQLLGIVSHTPQE
TERLEDSRKSAGFEDIARLAVPEEQKLYTWWSYRAADWAASNRGRRLDHIWANKAAMEDV
KVSSYRIHPAWRSGWKPSDHAPVSLTLKA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtccgatcaagatcaccacctggaacatcaattccgttcgcctgcgggccccg
aatgtcgaggctttcgtcgccgctgaaaagccggacgtggtgtgccttcaggaaaccaaa
tgccaggacgcggaattcccgctgaaggccttcaaggatatgggcctgccctatctcgtg
atccgcgggcagcgcgggggccatgccggggtggcgatcgcgtcgaggctgccactggaa
caggtggatgtgcccgacctctgccgggagaaccatgcgcgggtgattgccgcgcggctg
ccctcgggccttgaggttcacaatatctatctgcccgccggcggagacacaccggacccc
gatgcgaatgacaagtttgcccacaaactggattttcttgaccggctcggccccggctac
aagaagctgaagaagggggtgaagcgggttctggttggcgatctcaatgtggcgccgcat
gaaaacgatgtctggtcgcacaagcagcttctggggatcgtctcgcataccccgcaggag
accgagcggctggaggactcgcgcaaatccgcagggtttgaggacattgcccgccttgcc
gtacccgaggagcagaagctgtatacctggtggagctaccgcgccgccgactgggccgct
tccaatcgggggcgccggctggaccatatctgggccaacaaggcggcgatggaggacgtg
aaggtcagctcctaccgcatccatccagcctggcgcagtggctggaaaccgtccgaccat
gcaccggtatcgctgacgctgaaagcctga
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