Hyphomicrobium nitrativorans: W911_00875
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Entry
W911_00875 CDS
T02943
Name
(GenBank) chromosome segregation protein SMC
KO
K03629
DNA replication and repair protein RecF
Organism
hni
Hyphomicrobium nitrativorans
Pathway
hni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
W911_00875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hni03400
]
W911_00875
DNA repair and recombination proteins [BR:
hni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
W911_00875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
ABC_tran
AAA_22
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHB47279
UniProt:
V5SBC3
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Position
complement(190762..191961)
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AA seq
399 aa
AA seq
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MVSATTHEASAEEQAASRLWVERLSLTGFRTYASAALELGPEPVVLTGPNGSGKTNVLEA
VSLLAPGQGLRQAPLADLAKTGGDGSWSVAARVHTAVGPVTIGTGRTATERYDNRPAARL
VRIDGEPKSGSGALADYVEMVWITPATDGLFTGPASERRRFLDRLIVCFDTGHRTRANRF
ERAMAQRNRLLSDGVTRSAELDGFELVMAEMGIAMAAARAEAVAALGAVIAARRTRDPES
PFPWSDVALEGAVDADLATRPAVDVEDAYARRLREVRERDRGAGRALDGPHRSDLAVAHG
PKQTAARLCSTGEQKALLMGLLLAHAELVTARRDSVAPMMLLDEVTAHLDGDRRAALFEE
LLRLGTQAWMTGTDRDAFSSLAGRAQFWRVSDGFVTRAG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
ttggtctctgccacgacacatgaagcgtctgccgaggagcaagccgcttcccgcctctgg
gtcgagcgtctctcgctgacgggctttcgcacgtacgcgtcggcggcgctggaactcgga
cctgagcccgtcgtgctgacgggccccaatggctccggaaaaaccaatgtgcttgaagcg
gtgtcgctgcttgcgcccggacaggggctgcgccaagcgccgctcgccgacctcgcgaag
acaggcggcgacggaagctggtcggtcgcggcgcgcgtgcacaccgctgtcggtcccgtc
accatcggcaccggccgcaccgccacggaacgctacgacaaccgccccgccgcgcgtctc
gtccgcatcgacggcgagccgaagtcgggctcgggcgcgctcgccgattacgtcgagatg
gtctggatcacgcccgcgacggacggcctcttcaccggccccgcatccgaacgccgccgc
ttcctcgaccggctcatcgtctgtttcgacacgggccaccgtacgcgcgcaaaccgtttc
gaacgcgcgatggcgcagcgcaatcgcctcctgtccgacggcgtgacgcgtagcgcggaa
cttgacggtttcgaactcgtcatggccgagatgggaatcgccatggccgcggcgcgcgcg
gaggctgtggccgcgctgggagccgtcattgccgcgcggcgcacgcgcgatcccgaaagc
ccgtttccctggagcgacgtcgcgctcgaaggggcggtggatgccgatctcgcgacgcgc
cccgccgtcgatgtggaagatgcctacgcgcgccgcctgcgcgaggtgcgcgagcgcgac
cgtggagccgggcgtgcgctcgatggtccgcacagaagcgatctggcggtggcgcacgga
ccgaagcagacggcggcgcgtctgtgttcgaccggcgagcagaaggcgctcctgatgggg
ctgttgctcgcccacgcagaactcgtcacggcgcggcgcgacagcgtggcgccgatgatg
ttgctcgacgaggtgacggctcacctcgacggcgatcgccgggccgcattgttcgaagag
cttttgcgtctcggcacgcaagcgtggatgacgggaaccgatcgcgacgcgttttcgagc
cttgcgggaagagcgcagttttggcgcgtatcggacggctttgtgacacgcgccggctga
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