Hymenobacter nivis: DDQ68_19385
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Entry
DDQ68_19385 CDS
T05498
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DDQ68_19385
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hnv01007
]
DDQ68_19385
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hnv03016
]
DDQ68_19385
Enzymes [BR:
hnv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DDQ68_19385
Amino acid related enzymes [BR:
hnv01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DDQ68_19385
Transfer RNA biogenesis [BR:
hnv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DDQ68_19385
Prokaryotic type
DDQ68_19385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
tRNA-synt_His
RNase_Zc3h12a
DUF2922
PGM_PMM_II
Motif
Other DBs
NCBI-ProteinID:
AWM34748
UniProt:
A0A2Z3GND4
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All DBs
Position
4362738..4365176
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AA seq
812 aa
AA seq
DB search
MRISFDWLKTLIPTDKTAAEIGALLTGSGLEVESLEELESIPGGLRGVVLGTVLTREKHP
DADKLSLTTVDVGDGTPRQIVCGAPNVAAGQRVVVALEGATLHPTAGEPFKIKKSKIRGA
ASEGMICAEDEIGLGTSHAGIMVLDTDLPNGTPAADYFGLGTDTAFEIGLTPNRADAASH
YGVARELRALLHQPAHLPDVSQFRAPTTATRAVGVIVEDAAACPRYAGLLLDNVHVGPSP
EWLQRRLRSIGLSPINNVVDVTNFVLHELGQPLHAFDADRIDGDTILVKRASGFLNQFET
LDGVARKLTEDDLVIADAEGYPMALAGVFGGKQSGVSEGTTRVFLESAYFAPAAVRRTSQ
THGLKTDASFRFERGTDPNMVLPALHRAALLLQEVAGARPAAPVVDVYPLPLGPTAVRLR
LPRVERLVGQYIEPARIRQILNDLDIDITAEHFDEQGHEEWTLAVPRHKVDVTREVDVIE
EILRIYGYNNVALRPHNSATFLAKFPNPDPEVLRQKVAALLSGQGFSEILTNSVVNAAYF
EGPGAPDETIVRLLNPNSGELNVLRPSLLPSGLETVRHNVNRRQKDLKLYEFGKTYHRRA
DGGTEERNVLALYLTGNATAETWQHPARKTAFPDLAGAVVQVLGALGHGQPAQQPTDHPY
LAGGLALLAHNQPVAQAGAVAGPLLKRLDVGQPVWYAELDWDALVRKYRAALVARELPKF
PEVRRDLSVVVDQAVTFDQLRRIALRTEKKLLQSVNVFDVYEGPNLGTGKKSYSVSFALQ
DFSQTLSEQAIDQVMQRLIAQFEQQAGALIRK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatctccttcgactggctcaaaacgctcattcccaccgataaaaccgccgccgag
attggggccctgcttactggctcggggctggaagtggaaagcctggaggagctggaaagc
atccccggcgggctgcgcggcgtggtgctgggcacggtgctcacccgcgaaaagcacccc
gacgccgacaagctcagcctcaccaccgtggacgtgggcgatggcacgccgcgccaaatt
gtgtgcggggcccccaacgtggccgccggccagcgcgtggtggtggccctggagggcgcc
acgctgcaccccacggcgggcgagccgttcaaaataaagaagagtaaaatccgcggcgcg
gcctccgagggcatgatttgcgccgaggacgaaattgggctgggcacctcgcacgccggc
atcatggtgctcgacaccgacctgcccaacggcacgcccgccgccgactacttcggcctg
ggcaccgacacggcctttgaaatcggcctcacgcccaaccgcgccgacgccgcctcgcac
tacggcgtggcccgcgagctgcgcgccctgctgcaccagcccgcccacctgcccgacgtg
agccagtttcgggcccccaccacggctacccgagccgttggtgtgattgtagaggacgct
gccgcctgcccccgctacgccggattactgcttgataacgtgcacgtagggccctcgccc
gagtggcttcagcgccggctgcgcagcatcggcctgagccccatcaacaacgtggtagac
gtgaccaacttcgtgctgcacgagctgggccagcctttacacgcattcgacgccgaccgt
attgatggcgatacgattttagtgaagagagcatctggatttcttaatcaattcgaaact
ttagatggagtggcacgcaagctgacggaagacgatctggtaattgccgatgctgaagga
tacccaatggcattagcaggcgtgttcggaggcaaacaatctggcgtaagcgaaggcacc
acccgcgtgttcctcgaaagcgcctacttcgcgccggccgccgtgcgccgcaccagccag
acccacggcctgaaaaccgacgcttccttccgcttcgagcgcggcaccgaccccaacatg
gtgctgccggcgctgcaccgcgccgcgctgctgctgcaagaggtggccggcgcccgcccc
gccgccccggttgtggacgtatacccgctgccgctgggccccacggccgtgcgcctgcgt
ctgccgcgcgtcgagcggctggtgggccagtacatcgagcctgctcgcatccggcagatt
ttgaacgatttggatatcgacatcaccgccgagcacttcgatgaacagggccacgaggaa
tggacgctggccgtgccccgccacaaggtggacgtaacccgcgaggtcgacgtcatcgag
gaaattctgcgcatttacggctacaataacgtggcgctcaggccccacaactcggccacg
ttcctggccaagttcccgaaccccgacccggaggtgctgcgccagaaggtagcggcgctg
ctcagcggccaaggcttttcggaaatcctgaccaactcggtggtgaacgccgcttacttc
gagggccccggggcccccgacgaaaccatcgtgcgcctgctcaaccccaacagcggcgag
ctgaacgtgctgcgcccttcgctgctgccctcgggcctcgaaacggtgcgccacaacgtg
aaccgccgccagaaagacctcaagctctacgagtttggtaaaacctaccaccgccgcgcc
gacggcggcaccgaggagcgcaacgtgttggccctctacctgacgggcaacgccacggcc
gaaacctggcagcacccggcccgcaaaaccgccttccccgacctggccggggccgtggtg
caggtgctgggggccctgggccacggccagcccgcccagcagcccaccgaccacccatac
ctggccggcggcctggccttgctggcccacaaccaacccgtggcccaggccggggccgtg
gcggggcccctgctcaaacgcctcgacgtgggccagccggtgtggtacgccgagctggac
tgggatgccctggtgcgcaagtaccgcgccgccctggtggcccgcgagctgcccaagttc
ccggaggtgcgccgcgacctgagcgtggtggtggaccaagccgtgaccttcgaccagctg
cgccgcattgccctgcgcaccgagaagaaactcttgcagagcgtgaacgtgtttgacgtg
tacgagggccccaacctgggcacaggtaagaaatcgtattcggtgagcttcgctttgcag
gacttctcgcaaacgctcagcgagcaggccatcgaccaggtgatgcagcggctcattgcg
cagttcgagcagcaagcgggggccctgattcggaagtaa
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