Hoeflea sp. IMCC20628: IMCC20628_00889 Help Entry IMCC20628_00889   CDS       T03926                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism hoe  Hoeflea sp. IMCC20628 Pathway hoe03030   DNA replication hoe03410   Base excision repair hoe03420   Nucleotide excision repair hoe03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hoe00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     IMCC20628_00889    03410 Base excision repair     IMCC20628_00889    03420 Nucleotide excision repair     IMCC20628_00889    03430 Mismatch repair     IMCC20628_00889  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hoe03032]     IMCC20628_00889    03400 DNA repair and recombination proteins [BR:hoe03400]     IMCC20628_00889 Enzymes [BR:hoe01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      IMCC20628_00889 DNA replication proteins [BR:hoe03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      IMCC20628_00889 DNA repair and recombination proteins [BR:hoe03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      IMCC20628_00889    NER (nucleotide excision repair)     GGR (global genome repair) factors      IMCC20628_00889    MMR (mismatch excision repair)     DNA ligase      IMCC20628_00889   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       IMCC20628_00889 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT PTCB-BRCT Motif Other DBs NCBI-ProteinID:  AKH99608 UniProt:  A0A0F7PK57 LinkDB All DBs Position 936868..939231 Genome browser AA seq 787 aa AA seqDB search MDELNDGLFGQYEKHPDALAFYTRDGGYRKSSIDQAARKLTVDINALVISLGPSINDVES AICKFPDNIIADLYMTMHMPYANYSRENEKIYDFFKRNSEYSKNFKTLHRKILDYIGVVS IAYEEGAPVMTDIEFDVVKELAFKIEGLASEDLTKFYEAVGSRLSEKFEKITHKVPMLSL DNAFSDEDVRDFVHSVYRFLGQLPDQSIALTAEPKIDGLSMSIRYEDGKLVSAATRGDGT TGENVTANIKTISEIPKQLPKGAPSVVEVRGEVYMAKDDFLALNARMEAEGKQTYVNPRN TAAGSLRQLDAKITASRKLRFFAYAWGDMSEMPADTQHGMIEVFSAWGFPVNPLTKRLHS VEELIAHYNTIGLERAGLPYDIDGVVYKVDRLDLQARLGFRSRSPRWAIAHKFPAEKAVT KLTAIDIQVGRTGALTPVARLTPVTVGGVVVTNATLHNAEEIARLGVKINDLVEIQRAGD VIPQILKVVESPDDAVEFEFPKTCPCELKTEVIREETAGGVEGVIRRCSGEFACPFQRKE HLKHFVSRKAFDIDGLGEKQIEFFYDDTTLPIRQPADIFTLKARDEANGLQRLKNRDGYG DTSAQKLFDAIDDRRTIALDRLIFGLGIRHVGEQTAKTLARAYGDWASVHQAAIAIAAGD KAAIEEMDALDDIGPAVVESIGRFFGEPHNIEMVEKLVDELTILEAEKPAQHSPVAGLTV VFTGSLEKMTRDEAKAMAERLGAKVAGSVSKKTDILVAGPGAGSKLTKAQGLGVRTMTED EWFELVG NT seq 2364 nt NT seq  +upstreamnt  +downstreamnt atggacgagttgaatgatggtctttttgggcaatatgaaaagcatccagatgcattggct ttctatacacgcgatggtggatatcggaaaagcagtattgaccaggccgcgcgcaagctg actgttgatattaatgcgctcgttatatcgcttggtccaagtataaatgatgttgagagt gccatatgtaaatttccagacaatataattgcagatttatatatgacaatgcatatgccc tatgcgaattactcacgtgaaaatgaaaaaatatatgatttctttaaaaggaattcagag tattcaaaaaatttcaaaacgctgcaccgaaaaatattggattacattggtgtagtgagt attgcttatgaggagggtgctccggtaatgacagacattgagtttgacgtcgtcaaagag ttagctttcaagattgaaggtctcgcttcagaggacctaaccaaattttatgaagctgtt ggatcaaggctttcagaaaaatttgagaagatcacccacaaggtgccgatgctgtcgctc gacaacgcgttttccgacgaggacgtgcgcgacttcgtccattcggtctaccgtttcctc gggcagttgccggaccagtcgattgcgctgaccgccgaaccgaaaattgacgggctgtcg atgtcgatccgctatgaggacggcaagctggtgtcggctgcgacccgtggcgacggcacc accggcgaaaacgtcaccgccaacatcaagaccatctccgaaatccccaaacagttgccc aagggcgcgccctccgtcgtcgaggtgcgtggcgaagtctacatggccaaggacgacttt ctggcgctgaacgcgcgcatggaggccgagggcaagcagacctatgtcaatccgcgcaac accgccgccggatcgttgcgccagctcgatgccaaaatcactgccagccgtaagcttcgc ttctttgcctatgcctggggcgacatgtcggagatgccggccgacacccagcacggcatg atcgaggtgttttctgcctggggttttccggtcaatccgttgaccaaacggcttcacagt gtcgaggagctgattgcccactacaacaccatcgggctggaacgcgccgggttgccctat gatatcgacggcgttgtctacaaggtcgaccggctcgacctgcaggcccgccttggcttc cgctcgcgcagcccgcgctgggccatcgcccacaagttcccagctgaaaaggccgtcacc aagctcaccgccatcgacatccaggtcggccgcacaggcgcgctgaccccggtggcacgg ttgacgccggtcaccgtcggcggcgttgtcgtcaccaacgcaacgctgcacaatgccgag gaaatcgcccggcttggcgtgaagatcaacgatctggtcgaaattcagcgtgccggcgat gtgattccgcagatcctcaaggtggtcgagtcgcctgacgacgcggtcgaattcgagttt cccaaaacctgcccctgcgagctgaagaccgaggtcatccgtgaggagaccgcgggcggt gtcgaaggcgtcatccgccgctgttcgggcgaatttgcctgtccgttccagcgcaaggaa catctcaagcatttcgtctcgcgcaaggctttcgacattgacgggctgggcgaaaagcag atcgagttcttctatgatgacaccacgctgccgatcaggcagcctgccgacatcttcacg ctgaaggcgcgcgacgaagccaacggcttgcagcggctgaaaaaccgcgacggctatggc gacacctcggcgcagaagctgtttgacgccattgatgaccggcgcacgattgcgctcgac cggctgatcttcggcctcggcattcgtcatgtcggcgagcagaccgccaagacgcttgcc cgcgcctatggcgactgggcctcggtgcatcaggcggcgattgcgattgcggctggcgac aaggccgctatcgaggagatggacgcgctcgacgatatcggtccggcggtggtcgaatcc atcggccgtttcttcggcgagccgcacaatatcgagatggtggaaaagctggtcgatgaa ctcaccatcctggaagccgaaaaaccggcgcagcattcccccgtcgccggtctcaccgtg gtgtttaccggcagtctcgaaaagatgacccgggatgaagccaaggcgatggccgagcga ctgggcgccaaggttgccggctcggtgtcgaagaagaccgacatcctggttgccgggccg ggtgcaggctccaaactcaccaaggcgcaaggcttgggcgtgcgcaccatgaccgaggac gaatggttcgagctggtgggctga

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