Vreelandella olivaria: HORIV_37020
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Entry
HORIV_37020 CDS
T06227
Name
(GenBank) hypothetical protein
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
hol
Vreelandella olivaria
Pathway
hol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HORIV_37020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hol03400
]
HORIV_37020
Enzymes [BR:
hol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HORIV_37020
DNA repair and recombination proteins [BR:
hol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HORIV_37020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
BBI51281
LinkDB
All DBs
Position
complement(2513441..2513890)
Genome browser
AA seq
149 aa
AA seq
DB search
MPEGPEIRRAAGRIEQHIGGRMIDDVWFAFPELAEQAASLIGTRVSRVDTRGKAMLIRFS
DQRVLYSHNQLYGIWKLHSEDKPPNTKRTLRVRLSAEGHCASLYSASDISLWHAENLTQH
PFLARLGPDLLSQEVVPSDAAAAQFKAVS
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaggcccagaaattcgacgcgcggcaggtcgtattgagcagcatataggcgga
cggatgatcgacgatgtctggttcgcctttcctgagcttgccgagcaggcggcgtcattg
atcggtacgcgggtttcccgggtagataccaggggcaaagcgatgctgatccggttctcc
gatcagcgcgtgctttactcccacaatcagctctatgggatttggaagctgcacagcgag
gataagcctccaaacaccaagcgcacgctgcgcgttcgattgagtgcagaagggcattgc
gcaagtctctacagcgcctccgatatctccctctggcacgcagaaaatctcactcagcac
cctttcttagcccgcctgggcccggatctgttgagtcaggaagtggtgccatccgatgca
gcagcggctcaatttaaagcagtttcataa
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