Halothermothrix orenii: Hore_02290
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Entry
Hore_02290 CDS
T00838
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hor
Halothermothrix orenii
Pathway
hor03420
Nucleotide excision repair
hor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hore_02290
03430 Mismatch repair
Hore_02290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hor03400
]
Hore_02290
Enzymes [BR:
hor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hore_02290
DNA repair and recombination proteins [BR:
hor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hore_02290
MMR (mismatch excision repair)
Other MMR factors
Hore_02290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
CarD_TRCF_RID
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACL68990
UniProt:
B8D121
LinkDB
All DBs
Position
233978..236125
Genome browser
AA seq
715 aa
AA seq
DB search
MLSDSSDILTGLNPEQKKAVEHFEGPLLILAGAGSGKTRVLTHRIAYLIENYGVNPLQIL
AVTFTNKAAGEMKERVDNLLGGMAGDLWVSTFHSLCARILRKEIGKIGYDNNFVIFDTDD
QQKLISRILKELNLDPKKTRPRAILSEISRAKNELIDPRSYANNVGDYFQDITARIYPLY
QERLKESNALDFDDLIMKTIEVFVDNPMVLEYYQERFKYILVDEYQDVNFAQYKLVQLLA
NKYRNLCVVGDPDQGIYGFRGADIRNILNFEEDYPEARVIKLEQNYRSKEKILKAAHHVI
RNNTARKEKRLWTKRGKGEDLKLYVAFDDKDEASYVCRKIKELKREKNYKFSDFAVLYRT
NSQSRSVEEMMVKYAIPYQIVGGFRFYDRMEIKDILAYLRVIYNPSDEVSLLRIINRPKR
GIGQGTISKLSRYARERGISLYKAGTEAESNPYLTASFKKRVKAFFDLLEELREKSETLS
IDTLTHQVVTRTGYQRELNEEGTQQARNRLENIQELFSVIEEFMKGNENKTLGAFLEEVS
LISDVDNMEDNQNVVTLMTLHSAKGLEFPVVFIIGMEEGLFPHANSMMDHEELEEERRLC
YVGITRARDELYLTRARERMRFGQRKPYPPSRFLDEIPPQLFEDNNDKKEEILGNIKEKE
SKTGEYKVGDTVVHPRWGKGQIVGVRENRGLELKINFGKGKVKTLLAEYAPIQKA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
ttgttgtctgatagcagtgatattctgacaggattaaatcctgaacaaaagaaagctgta
gaacattttgaaggccccctgttgattttagcgggggccggtagtgggaaaaccagggtg
ttaacccaccgcattgcatatctaattgaaaattatggtgttaatccccttcagatactg
gcagtaacctttaccaataaggctgccggtgagatgaaggagagggttgataatcttctg
ggaggaatggctggagacctctgggtcagcacctttcattcattatgtgcccgtatttta
cggaaagagataggtaagatcggttatgataataactttgtaatcttcgataccgatgac
cagcagaaattaatatccaggattttaaaagaattaaatctcgatccgaaaaaaaccagg
ccaagggctatcttatctgaaattagcagggccaaaaatgagttaattgatccccggtcc
tatgccaataatgttggtgattactttcaggatataacagcccgtatttatcccctgtac
caggaaaggcttaaggagagcaacgctcttgattttgacgatttaattatgaaaaccatt
gaggtttttgtggacaaccccatggttttagagtattaccaggaacgattcaagtatatc
cttgttgacgagtaccaggatgttaactttgcccagtataaactggttcaactcctggcc
aataaataccggaatctctgtgttgtcggtgaccccgaccagggaatatacggtttccgg
ggggctgatattcgtaatatccttaattttgaggaagattacccggaggccagggttata
aagctggaacagaactaccgctccaaagagaaaatattaaaggctgcccatcatgtcatc
cgcaataatacagcccgtaaggaaaagcgtctctggacaaaacggggtaaaggtgaagat
ttgaagctttatgtggcttttgatgacaaagatgaggcttcctatgtctgccggaaaata
aaagaattaaagagggagaaaaattataaatttagtgattttgctgtgctctaccgtacc
aattcccagtcccggtctgtagaagagatgatggttaagtatgccataccttaccagatt
gttggtggatttcggttttatgaccggatggaaattaaagatattctggcctatctcagg
gttatctataatccatccgatgaagtcagtttattgcggattattaatcgtcctaaaagg
ggcatagggcagggaaccattagcaagttatcaagatatgccagagagagggggataagc
ctgtataaggctggaacagaggcagaatctaacccttatcttaccgcttcttttaaaaag
agggttaaagccttttttgaccttcttgaggaactgagggaaaaaagtgaaaccttaagt
attgatacgttaacccatcaggtagtgaccagaacggggtaccagcgtgaacttaatgaa
gaaggtacccagcaggcccgaaaccggctggaaaatatccaggagttattttcagtgatt
gaggagtttatgaagggtaatgaaaataaaactctgggtgctttcctggaagaagtatca
ctcatttctgatgtagataatatggaggataatcagaatgtggttaccctgatgacactc
cattctgccaaagggctggaatttccagttgtttttattatcggaatggaagagggttta
ttccctcacgccaactccatgatggatcatgaagaactggaagaagagaggcgattatgt
tatgttggtataaccagggccagggacgaactatatttgactagggcccgggagcggatg
aggtttggtcaacggaaaccctaccccccttccaggtttttagatgaaattcctccacag
ttatttgaggataataatgataaaaaagaggaaatattgggtaatataaaagagaaagaa
agtaaaaccggagaatataaagtaggagatacagtggttcaccccaggtggggaaaagga
cagattgtaggtgtcagggaaaacagggggcttgagcttaagataaacttcggaaaaggg
aaggtgaaaactcttctggccgagtatgcccccattcagaaggcttaa
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