Helicobacter pylori HPAG1: HPAG1_1238
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Entry
HPAG1_1238 CDS
T00365
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpa
Helicobacter pylori HPAG1
Pathway
hpa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPAG1_1238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpa03021
]
HPAG1_1238
03400 DNA repair and recombination proteins [BR:
hpa03400
]
HPAG1_1238
Enzymes [BR:
hpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPAG1_1238
Transcription machinery [BR:
hpa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPAG1_1238
DNA repair and recombination proteins [BR:
hpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPAG1_1238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
ABF85305
UniProt:
Q1CRW7
LinkDB
All DBs
Position
complement(1299836..1300870)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPIGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGSMELR
ARDLNSDHIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSETTRELMPEGYMPLDGSF
TPIKKVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
caccctattagaagactcttgcttttaagctctgtggggtatgctcccataggtttaaag
attgaaggcgtccatcatgagtttgactcattaaggggggttactgaagatgtgtcgctt
tttatcatgaatttaaagaatatccgttttatagccaaggcgttagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggtctatggagcttagg
gctagggatttgaattctgatcatatagaaatcgtcaatcctgaaatgcctctagccaca
atcaacgaagacgctcaattgaatttttcgctcattatctataaaggaatggggtatgtc
ccaagcgaaactacaagagaattgatgcctgagggctacatgccactagacggctctttc
acgccgattaaaaaggtcgtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ttgtcagcggtgaaagtgatgagcaagcaactaggcgtttttggcgaaagacccattgct
aacacggagtattcaggcgattacgcccaaagagatgacgctaaagatttgagcgctaag
attgagagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactcgtgttgatgagcgaagaagagcttaagggcgtgaaaaacatgggt
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagccctgaacaaagagagagtttaaagaaaagattagaaaaattagaagacaaa
ggaggtaacgactga
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integrated database retrieval system
