Glaesserella parasuis KL0318: JT17_02690
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Entry
JT17_02690 CDS
T03312
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hpak
Glaesserella parasuis KL0318
Pathway
hpak03030
DNA replication
hpak03410
Base excision repair
hpak03420
Nucleotide excision repair
hpak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JT17_02690
03410 Base excision repair
JT17_02690
03420 Nucleotide excision repair
JT17_02690
03440 Homologous recombination
JT17_02690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpak03032
]
JT17_02690
03400 DNA repair and recombination proteins [BR:
hpak03400
]
JT17_02690
Enzymes [BR:
hpak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JT17_02690
DNA replication proteins [BR:
hpak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JT17_02690
DNA repair and recombination proteins [BR:
hpak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JT17_02690
NER (nucleotide excision repair)
GGR (global genome repair) factors
JT17_02690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AIK89723
LinkDB
All DBs
Position
complement(525211..528075)
Genome browser
AA seq
954 aa
AA seq
DB search
MATIAKNPLVLVDGSSYLYRAFHAFPPLTNKQGEPTGAMYGVLNMLKSLIAQVEPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDELRSQIQPLHAMIKALGIPLLSIEGVEADDVIGT
LAVQASQAGKHVLISTGDKDMAQLVNDHIMLINTMNNTLLDREGVIEKYGIPPELIIDYL
ALLGDSSDNIPGVKGVGEKTAIALLQGIGSMQAIYANLDKVAELSFRGAKTFAPKLEAEK
ETADLSYLLATIKTDVALDVTYDQLVTQPQQRDQLVELFGRYEFKRWLNEVMNDANPVTQ
TSAEKIPNNYQATQAVSAEQKSAPFAKVEIDRTAYDCVNSPELFTKWLAKLQMAELVAVD
TETDNLDAMQANLVGISFGLENGEACYIPLAHKGKITQPTQVDLFGESEAELDEVEALLP
NQLNKADCLAQLKPILENPNIRKIGQNIKYDLTIFARNGIELQGAAFDTMLQSYTLDSTG
RHNMDNLAERYLGHQTIPFEELAGKGKHQLTFDQIELDKATEYAGEDAEITMKLHQLLWS
ELQKTPELVKLFEQIEMPLVSVLSRVERNGVLIDPAKLLAHSVEIEQRLKELETLVHQEA
GEVFNLASTKQLQEILFNKLGLPILKKTPKGAPSTNEEVLEELAQMGHQVPVLLMEHRGL
SKLKSTYTDKLPQMINAQTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEQGRRIRQAF
IARDGYVILAADYSQIELRIMAHLANDANMIKAFAEGKDIHRSTAAEIFGVPLEAVTSEQ
RRSAKAINFGLIYGMSEFGLANQLGISRTDAKKYMELYFQRYPAVQQFMLDIREKAAEKG
YVETLFGRRLYLPEINSSNQMRRKAAERVAINAPMQGTAADIIKVAMIGIDQAVRNCEDI
AMIMQVHDELVFEVKADRVEHYTPLIKAEMEKAIELKVPLIAEVGVGGNWDEAH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaattgcaaaaaatccgctcgttttagtggacggttcgtcctatttatatcgt
gcattccacgcatttccccctttaactaacaaacaaggtgagccaacaggggcgatgtat
ggcgtgttgaatatgttaaaaagcctgattgcacaggttgaaccaagccatattgctgtc
gtgtttgatgcgaaagggaaaactttccgtgatgagctgtttgaacagtataaatcccac
cgtccgccgatgcccgatgagcttcgttcgcagatccaacctttgcacgcaatgattaaa
gcattgggtattccgctgttgtcgattgaaggggtggaagctgatgatgtaattggaacg
cttgcagtgcaggcttcacaagcaggtaagcacgttttaatcagtacgggcgataaggat
atggctcaactggtgaacgatcatattatgctgattaacacgatgaacaataccttgtta
gatcgtgaaggggtgattgaaaaatatggcattccgcctgagttgattatcgactattta
gccttattgggcgactcgtccgataatattccaggggtaaaaggtgttggtgagaaaacg
gcgattgcgttgttgcaaggtattggctcaatgcaagcgatttatgcaaatttagacaaa
gttgcagagttatcatttcgtggggcaaaaacctttgcaccgaaattggaagcagaaaaa
gaaacagccgatctctcttatctgttagcgacaatcaaaaccgatgttgcccttgatgtc
acttacgatcagcttgttactcaaccccaacagcgagatcaactggtagaactctttggt
cgttatgaatttaaacgctggctgaacgaagtgatgaatgatgctaacccagtgacacaa
acatcggcagagaaaatcccgaacaattatcaagccacacaagcggtcagtgccgaacaa
aaatctgcaccttttgcaaaagtcgagatagatcgcaccgcttacgattgcgtgaacagc
cctgaactctttaccaaatggctggcaaaattgcaaatggcagagcttgtggcggtggat
accgaaacagacaatttagatgcaatgcaagcaaatttagtcgggatttcgtttggttta
gaaaatggcgaagcgtgctacattccgttggcacataaaggcaaaattacacagccgacc
caagtggatctgtttggtgaaagtgaagcagaactcgatgaagtcgaagcgttactgcct
aaccagttgaacaaagcggactgtttggcacagttaaaaccgattttagagaacccaaat
atccgcaaaatcgggcagaatatcaaatacgatttaacaatttttgctcgcaacggcatt
gagctacaaggggctgcctttgatacgatgttgcaatcttacaccctagacagcaccggt
cgtcacaatatggacaatttggcagagcgttatttgggacatcaaactattccttttgaa
gagttggcaggtaagggcaaacatcagcttacattcgatcaaattgaactggataaagca
acagaatatgcaggggaagatgccgaaattacaatgaaattacatcaactcttatggtct
gaactacaaaaaacgcctgaattggtgaaactgtttgagcaaatcgaaatgccgttggtg
agcgtactttcccgtgtggaacgaaacggcgtattaatcgatcctgccaaactgttggca
cattcagttgagattgaacagcgtttaaaagagcttgaaacccttgtacatcaagaagca
ggagaagtgtttaaccttgcttccactaagcaactgcaagagattttatttaacaaactc
ggcttaccgattttaaagaaaaccccgaaaggtgcgccatcaaccaacgaagaagtgttg
gaagaactggctcaaatgggacaccaagtgcctgtgctgttgatggaacatcgtggcttg
agcaagctgaaatcgacctataccgataaactaccgcagatgattaatgcacaaacagga
cgtgtgcatacttcatatcatcaagcggtcacggcaacagggcgactttcatcaagcgat
ccgaatttacaaaatattccgatccgcaacgagcagggcagacgtatccgtcaagccttt
attgcccgtgatggctatgtgattttggcggcggactattcgcaaattgagttacgcata
atggcacatcttgctaatgatgcgaatatgatcaaagcctttgccgaaggtaaagacatt
caccgttctacggcggcggaaatttttggcgtgccgttggaagctgtgacgagtgaacaa
cgccgtagtgccaaggcgattaacttcggcttgatttacggaatgtctgaatttggcttg
gcaaatcaactgggcatttctcgtaccgatgcgaaaaaatatatggaactttacttccag
cgttatccagcggtgcaacagtttatgttagatattcgtgaaaaagccgctgaaaaaggc
tatgttgaaacgttatttggtcgccgtttatatttgcctgaaatcaactcaagcaaccaa
atgcgacgcaaagcggcggaacgtgttgccatcaacgccccaatgcaaggcacggcggca
gatattatcaaagtggcaatgattgggatcgatcaagcggtgcgaaattgcgaagatatt
gcaatgattatgcaagtacacgatgaattagtctttgaagtcaaagccgacagagtagag
cattacaccccactgattaaagctgaaatggaaaaagcgattgagcttaaagtgccattg
attgcagaagttggggttggaggcaactgggacgaggcgcattga
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