Glaesserella parasuis KL0318: JT17_03000
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Entry
JT17_03000 CDS
T03312
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hpak
Glaesserella parasuis KL0318
Pathway
hpak00470
D-Amino acid metabolism
hpak00550
Peptidoglycan biosynthesis
hpak01100
Metabolic pathways
hpak01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hpak00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JT17_03000
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JT17_03000
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JT17_03000
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpak01011
]
JT17_03000
Enzymes [BR:
hpak01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
JT17_03000
Peptidoglycan biosynthesis and degradation proteins [BR:
hpak01011
]
Precursor biosynthesis
Amino acid ligase
JT17_03000
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
GARS_A
R2K_2
Calmod_bind_C
ATPgrasp_ST
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AIK89779
LinkDB
All DBs
Position
complement(587587..588498)
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AA seq
303 aa
AA seq
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MSLKNEKIAVLFGGVSAEREISLNSGKSVFEALQSLGYNVEAIDTKEFPIEKLKEKGIQR
VFNILHGGIGENGVLQGALEQLGIPYTGCGVMASAITLDKFRTKLLWNAVGLPTAAMEVV
RRGQAVNSDEIIAKLGLPLFVKPASEGSSVGVSKVKTAEQLLPAIEEALKYDSIVLVEEN
LAGAEYSVPVLDGEVLPAVQIIPDGEFYDYHAKYISDNTQYVVPALNADRQAEVAKLVKQ
AYDVVGCRGWSRIDVMEDGEGNFRLVEVNTCPGMTSHSIFPKSAATVGYSFERLVERVLE
LSA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaaaaaacgaaaaaattgcggtgttatttggtggcgtttcagcagaacgtgaa
atttcgctcaattcaggcaaatcggtgtttgaagcattacaaagtttaggttataacgtt
gaagcgattgatacaaaagaatttccgattgaaaaattaaaagaaaaaggcattcagcgt
gtatttaatattcttcacggtggtattggtgaaaatggcgtgcttcaaggggcgttagag
caactcggtattccctatacaggctgtggcgtaatggcttcggcgattactttagataag
ttccgcaccaagctattgtggaatgcagtgggcttaccaacagcggcaatggaagtggta
cgccgtgggcaagcggtcaactccgatgaaattattgcaaaattaggtttaccattattt
gtgaaacctgcgagtgaaggctcaagtgttggcgtaagcaaagtgaaaaccgcagaacag
ttattacctgcaatcgaagaagcattaaaatatgattcaattgtgttggtggaagaaaat
ttagcaggggcggaatactctgtgccagtacttgatggtgaagtgttgcctgcggtgcaa
attattccagacggcgagttttatgactaccacgcaaaatatatttcggataatacccag
tatgttgtgccagcgttaaatgctgatcgccaagcggaagtcgctaagttagtgaaacag
gcttatgatgtggtgggctgtcgtggttggagccgaattgatgtaatggaagatggcgaa
ggaaacttccgtttagttgaagtgaatacttgcccaggtatgaccagtcatagtattttc
ccaaaatcagcggcgactgtgggttatagtttcgagcgtttagttgagcgtgtattggag
ttaagtgcgtaa
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