Glaesserella parasuis KL0318: JT17_08110
Help
Entry
JT17_08110 CDS
T03312
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpak
Glaesserella parasuis KL0318
Brite
KEGG Orthology (KO) [BR:
hpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpak03016
]
JT17_08110 (truD)
Enzymes [BR:
hpak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JT17_08110 (truD)
Transfer RNA biogenesis [BR:
hpak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JT17_08110 (truD)
Prokaryotic type
JT17_08110 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIK90666
LinkDB
All DBs
Position
complement(1617565..1618572)
Genome browser
AA seq
335 aa
AA seq
DB search
MQLAYLFGKPTQAGRLKVEFADFIVKEELGYDLSGDGEFVAVKIRKTDANTLFVGEKLAE
FVGISAKNMSYAGLKDRHAVTEQWFCLHLAGKETPDFTQFQLDGVEIIEVTRHNRKIRVG
SLAGNHFELLLRDVKESNVLTARLQQIQAVGFPNYFTEQRFGRDGHNLTQAQRWAKGEIS
VKDRKKRSFYLSAARSEIFNLVVSNRIELGLTQQVLENDLMQLAGSNSWFVAKAEELAAL
NKRLELQDILLTAPLVGENSATQTVSEYEQKIVVEHQDLLALMAKERMNSARRAMFCKPQ
HFEWLFEEEGLRLKFFLDAGSYATALVRELVQLEE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagcgtatttattcggcaaaccgacccaagcgggtcgattgaaagtagaattt
gccgattttattgtcaaagaagaacttggctatgatttgtcaggcgatggggaatttgtg
gcggtaaaaattcgtaaaaccgatgcaaataccttgtttgtgggcgaaaagttggcagaa
tttgttggtatttctgccaaaaatatgagttatgctgggttaaaagatcgccacgcagtc
acagaacaatggttctgtttacatttagcaggcaaagaaacgcctgatttcacacagttt
caactcgatggcgtagaaatcattgaagtcactcgccataaccgcaaaattcgggtagga
agtttggctggcaatcattttgagctattgctaagagatgtaaaagagagcaatgttctc
accgctcgtttgcaacaaatacaagcggtcgggtttccgaattattttaccgaacagcgt
tttggtcgagatgggcacaatttaactcaagcacagcgttgggcgaaaggcgaaatttca
gttaaagatcgcaaaaaacgcagtttttatctttctgccgctcgtagtgaaattttcaat
cttgtggtgtcgaaccgtattgaactcggtttaacccagcaagtgttggaaaatgattta
atgcaactggcaggttcaaacagctggtttgtagcgaaagcggaagaacttgcggcactt
aacaagcggttggaattgcaagatattttacttactgcaccgcttgtcggcgaaaactct
gccacacaaacggtgtctgagtatgagcaaaaaatcgtagtggaacatcaagatctactg
gcattaatggcaaaagaacgaatgaactcagctcgccgtgcgatgttctgtaaaccacaa
cactttgaatggctatttgaagaggaaggtttacggttgaaattctttttagatgctggc
agttatgctacggcgttggtgagagaattagtacagctcgaagaataa
DBGET
integrated database retrieval system
