Hafnia paralvei: AL518_04960
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Entry
AL518_04960 CDS
T05667
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hpar
Hafnia paralvei
Pathway
hpar03030
DNA replication
hpar03410
Base excision repair
hpar03420
Nucleotide excision repair
hpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL518_04960
03410 Base excision repair
AL518_04960
03420 Nucleotide excision repair
AL518_04960
03440 Homologous recombination
AL518_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpar03032
]
AL518_04960
03400 DNA repair and recombination proteins [BR:
hpar03400
]
AL518_04960
Enzymes [BR:
hpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL518_04960
DNA replication proteins [BR:
hpar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AL518_04960
DNA repair and recombination proteins [BR:
hpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AL518_04960
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL518_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH
Obc1_cap
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AMH17419
LinkDB
All DBs
Position
1090758..1093559
Genome browser
AA seq
933 aa
AA seq
DB search
MAEIPENPLILVDGSSYLYRAYHAFPPLTNRAGEPTGAMYGVLNMLRSLMLQYQPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLREQIEPLHKMVQAVGLPLLAVSGVEADDVIGT
LAQAAEKAGRHVLISTGDKDMAQLVTPNITLINTMNNTILGPQEVCDKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGSLKQIYSDLDKVATLSFRGAKTMGAKLELNK
DQADLSYLLATIKTDVELDVTCDDLKLKPMDTAQLHELFSRYEFKRWLEDAETGSWLSGE
KKAPPARKSAKDDTETSVTAVEETTAILSQENYLTILDDAALDSLIASLKAAKIFAFDTE
TDSLDVLTTNLVGLSFATAPGVAAYIPVGHDYLDAPDQLDRDDVLAKLKPVLEDANLLKV
GQNLKYDQGVMARYGIELQGIAFDTMLESYDLDSVAGRHDMDSLAERHLNHKTITFEEIA
GKGKSQLTFNQIALEQAAPYAAEDADVTLQLHLKLWPQLEKEAGLKKVFTDIDMPLVPVL
SRMERTGVLIDSNILGKHSQELAIRLDELEKKAHEAAGEPFNLSSPKQLQAILFEKQKLP
VVKKTPGGAPSTNEEVLAELSEQGFELPTIILEHRGLAKLKSTYTDKLPQMINPATGRVH
TSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPQGYKIVAADYSQIELRIMAH
LSGDKGLLTAFAAGKDIHRATAAEVFGLKLEDVTSEQRRSAKAINFGLIYGMSAFGLARQ
LNIARGEAQRYMDLYFERYPGVLEYMERTRQQAAEQGYVETLDGRRLYLPEIHSRNGMRR
KGAERAAINAPMQGTAADIIKRAMISVDAWLLQQKEPLVRMIMQVHDELVFEVHESVIEQ
TVEKVRELMEQSLELAVPLKVDVGTGENWDQAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaatacctgaaaaccctctgatcctagttgatggatcttcatacctgtatcgc
gcataccacgcttttcctccactaactaatcgtgcgggtgagcctacaggggcaatgtat
ggcgtgttgaacatgctgcgcagcctgatgctgcaatatcaacctagccacgtagccgtg
gtatttgacgccaaaggaaagactttccgtgatgagctgtttgctgaatataagtctcat
cgcccgccaatgccggacgatttacgcgagcaaatagaaccgctacataagatggtacaa
gcggtgggattgccgctgctggctgtatcgggcgttgaagccgatgacgtcatcggaacg
ctggcgcaggctgctgaaaaagcaggtcgccatgtactgatcagtaccggcgataaagat
atggctcagttggttacgccgaatattacgctgatcaataccatgaataatacgattctg
gggcctcaggaagtatgtgataaatatggcgtaccgccagagttgatcattgatttcctc
gcgctgatgggcgactcctcggataacattccaggtgtacctggagtcggtgaaaaaacg
gctcaggcattgttgcagggaattggtagcctaaaacagatctacagcgatctggataaa
gtcgcgacgctgagtttccgtggtgctaaaaccatgggtgccaaacttgaattgaataaa
gatcaggccgatctctcatatctgttggcgacgattaagaccgacgttgagctagacgtt
acctgtgatgatctcaagcttaaacccatggatacagctcagctgcatgagttgtttagt
cggtatgaatttaaacgttggctcgaggatgctgaaaccggctcttggttaagcggtgag
aaaaaagcgccgccggcgcgaaaatcggcaaaagatgatactgaaacctcggttaccgcc
gttgaagaaactacggcgattctgtcgcaagaaaattacctcactattctggatgatgca
gcgcttgatagcctcatcgccagtttgaaagcggccaagatttttgccttcgatacagag
acagactctctggatgtattgactaccaatctggttggtctgtcatttgccactgcgcca
ggcgtagcggcatatattccggttggtcatgattatctggatgcacccgatcaactggat
cgtgacgatgtattagctaagctaaaacccgtgctggaagatgctaacttgctgaaggtg
gggcagaacctcaagtacgatcagggagtgatggctcgctatggtattgagcttcagggg
attgcctttgacactatgcttgaatcttacgatctcgatagcgtcgctggccgccatgat
atggatagcttagctgagcgtcatctgaatcataaaacgatcacatttgaagaaattgcg
ggtaaggggaaatctcagctcacgtttaatcaaatcgctttggaacaggccgcaccttac
gcagccgaagatgccgatgttacattgcagctgcatctcaaactttggccacagttggaa
aaagaagccggtctgaagaaagtcttcaccgatattgatatgccgttggttcctgtgctt
tcccgtatggaacgtactggggtgctgatcgatagcaatattctgggtaagcactcgcaa
gagttagctattcgtttagatgagcttgagaaaaaggcgcatgaagccgcgggtgagccg
tttaatctctcttctccaaaacagctacaagctattctgtttgaaaaacagaaactgcca
gttgtgaagaaaacaccgggcggcgcaccctcgaccaacgaagaagtgttagctgagctg
tcggaacaaggttttgaactgccaaccatcattttggaacatcgtggtttagcgaagcta
aagagcacctataccgataaacttccgcagatgattaaccctgctactgggcgtgtgcat
acctcctatcatcaggcggttactgcgacaggacgcctctcatctagcgatccaaacctg
caaaatatccctgtgcgtaacgacgaaggtcgaaggatccgtcaggcctttattgcaccg
caaggctataagattgtcgccgccgactattcacagattgaactccgcatcatggctcat
ttgtctggtgataaaggtttactgactgcgtttgctgctggtaaagatattcaccgcgca
acggcggcagaggtgtttgggctgaaattagaagatgtgacgagtgaacagcgccgtagc
gcaaaagctatcaactttggtctaatttacggcatgagcgcatttggtttagctcgccag
ttgaatattgcacgtggtgaagcacagcgctatatggatctctattttgaacgctatcct
ggtgtgcttgagtatatggagcgtacccgtcagcaggccgctgagcagggctatgttgag
acgctagacggtcgccgtctctatctaccagagatccattctcgcaacggtatgcgccgt
aagggagctgagcgggcagcaatcaatgctcctatgcagggaactgcagccgatatcatc
aagcgcgccatgatttctgttgatgcatggctgctgcagcaaaaagagccattggtccgc
atgattatgcaggtgcacgatgaattggtgtttgaagtgcatgaatccgtgattgagcaa
accgtagaaaaagtccgcgaattgatggagcaaagcctagaattggcggttccgctgaaa
gtggatgtcggtacgggggaaaattgggatcaagctcactag
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