Glaesserella parasuis SH03: JL26_03600
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Entry
JL26_03600 CDS
T03301
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
hpas
Glaesserella parasuis SH03
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpas02000
]
JL26_03600
Transporters [BR:
hpas02000
]
Other transporters
Pores ion channels [TC:
1
]
JL26_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
Collagen
YadA_anchor
ESPR
Motif
Other DBs
NCBI-ProteinID:
AIK16958
LinkDB
All DBs
Position
659210..663595
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AA seq
1461 aa
AA seq
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MNKIFRVIWSHAQQAWVVVSELVKSYTKTSAYTDKRAQVCTSDYFLDKQQDKFKLSLLSL
VLLGIFFSPVAGSTTDLSYFQHGATYGTKHKSDAGTIGIGRQSTAGPGSIAIGQHTKADG
RTVVAIGYSAVTTDMGSPVAIGGHTKANGESAIAIGVHSSSGGKESIVLGHKANTTTGQT
VVIGAHASAKGQQSVAIGADTKADGYGSISIGGDDLNTTKYGKGSHSSTTAKGKASVAIG
GMSLAGGEGSIVLGPVASATHTEGIAIGARSKSTNEYGIAVGGGATAGKNAVAVGRESKG
TGANSIAIGNSAKTTGADSVVVGANINVTDGQLVAIGYQASAKSRSTALGYKASAGGRSS
VAVGEEAKTTPDRSTALGNNTVVSVGGGVALGYGSNANTAGGVEGLKQNHSVTTEPSTDA
NGFKSTEKVDGNKIGAVSVGLGSGNKLIKRQITNVAAGTQDTDAVNVAQLKSLTMLIGGD
DSSSGKVGIWDGKLEVKGTNGEIKTNASGSTITISLDDKIKKQLADAKAGSLTFKGEKTG
TGTITNDVSGQKWNANQDKTVTITSKETYQNGGVRYKGDNIEIYRKNLNNGNTEFHVLMK
DTPTFSSVQYGNNGPKITSTGGNLKVTGANGTSPVKITNLAQGTQNGDAVNYMQFSNAGW
KLAIAQGTGGQATPPTAHLIKIGDTATFTAGNNIKLEQKNGKITISTIGKLIKKTESLAN
GDLKITYTDGSSDTIAKGKDGKNGEKGEKGDGGEQGSAGPRGEAGPAGSPGSQGATGPVG
PKGDAGVKGDRGDRGEAGAVGPQDPAGPAGAKGDKSDTGPAGPVGPGGEPGPKGEQGIPG
VAGPKGDRGEAGPMGPQGPQGTAGAQEPKGDKGDPGQAGPAGPQGPASPTGSQGPAGPTG
SQGPAGPTGSQGPAGPTGPAGPQGPTGPTGPAGPKGENVGRGLGLKDDAESNKTALTPTD
AQKAIAGDNKDGKGGLLAQTGNALNNVATVKDLQAIAQAGLDLTGNNADTTVHRPLGTKL
TVEGEGKWNGKDSAANNLYVEAQVADNKLVVKMNRDLTNLNSVTLGTATMTGDKNTINLT
GAGEKVEEEFVKWDPVTKQPILDENGNLQKYKEKVDPRVKLSGIADGDISPNSTDAVNGR
QVYVLTYGMKFFHTNDGHNAEEQINHKSNTVDSRASGSYSTAVGYKAHAKGESSVALGNG
ATAGEQGVAIGHGAVASGKQSISIGTGNVVSGNNSGAIGDPNTIKADRSYALGNNNQVNA
GQSDVFVVGNNVKNTTSNSVFLGTNSGYVAAGATTAGAGALESQVIGGVYNAYAGGKATE
VVGVVSVGNVDSNGKMETRRIQNVAPGLISEQSTDAINGSQLYSLISQHKVHMGDIHNKI
NRNNKALRAGIAGSNAAAGLPQVYLPGKSMVAASAGTFKGQSALAVGYSRASDNGKLILK
LQGNANTSGEMGGSVGVGYQW
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatatttagagttatttggagtcatgctcaacaggcttgggtggttgtgtct
gagttagtaaagtcttataccaaaacatccgcttacacggataaaagagctcaagtatgc
acctcagattattttttagataaacagcaagataaatttaaattaagtcttttaagtcta
gtattactgggtatattttttagtccagtagcaggttcaactactgatttatcatatttt
caacatggtgctacttacgggactaaacataaatctgacgccggtactattggtattggt
agacagagtacggctgggcctggttctattgccatcggtcagcatacaaaagctgatggt
aggactgttgttgcgataggttattcagcagtaacgacagatatgggctcccctgttgcg
ataggcggccacactaaagcaaatggggagagcgcaattgccataggggttcattcaagt
tcgggaggaaaggaatctattgtcttaggccataaagccaatacgacaactggtcaaaca
gttgtaataggtgcacatgctagtgcaaaagggcaacaatctgttgctatcggggcagat
accaaagcggatgggtatggctccatatcaatcggtggagatgatttaaatacaacgaaa
tatggcaagggtagccattccagcacaactgcgaaaggtaaagcctctgttgctattggg
ggtatgtctttggctgggggcgaaggatctattgttttaggtcctgtagcatctgcaact
catactgaaggcattgctatcggtgcgagaagtaagtctaccaatgagtacggtattgcg
gttggtggtggtgcaactgctggaaaaaacgccgttgctgttggtagggagtcgaaaggt
actggggcaaattccatagcgataggtaattctgcgaaaacaacaggggcagactctgtt
gttgtgggtgccaatatcaatgtgacagatggacaattagtggcaattggataccaagca
agtgctaaaagtcgttctactgccttgggttataaagcctctgccggtggtaggagctct
gttgctgtgggtgaagaggcaaagacaacaccagacagatcaaccgcacttggtaataat
accgttgtctccgtgggtggcggtgtggcattgggttatggatctaatgcaaatacagct
ggcggtgtagaggggttaaaacaaaatcattctgtcacaacggaaccaagcactgacgct
aacggctttaaatccacagaaaaggttgatggtaataagattggtgcagtttctgtcggt
ttaggctcaggtaataaactcatcaaacgccaaatcaccaacgttgcggcaggtacacaa
gataccgatgcggtaaacgtggcacagcttaaatcgctcaccatgctaataggaggcgat
gacagcagtagtggcaaggtaggcatttgggatggcaaacttgaagttaaaggcacaaat
ggcgaaatcaagaccaatgcgtctggctcaaccatcacaatatcactagacgataagatt
aaaaaacaattagctgatgccaaagcaggaagtttgacattcaaaggcgaaaaaacaggt
acaggtacaataacaaatgatgtttcgggtcaaaaatggaatgccaaccaagataagacc
gttaccattacaagtaaagaaacataccaaaatggtggtgttcgatacaaaggcgataac
attgaaatttatcgtaaaaatcttaacaatggaaacacagaattccatgtgttgatgaaa
gatacaccaacattcagcagcgttcaatatggcaataatggacctaagattaccagcact
ggcggtaatctaaaagtaacaggtgcaaacggcacttccccagttaagatcaccaattta
gcacaaggtacacaaaatggcgatgcggtgaactacatgcaattttcaaatgctggttgg
aaacttgcaattgctcagggaacgggggggcaagcaactccacctacggcacatcttatc
aaaataggcgataccgcaacctttaccgctggaaataatattaaattagaacaaaagaac
ggaaagattacgatttctacgattggtaagttaattaaaaagactgaaagcctagcaaat
ggtgatttgaaaattacttatacggatggcagcagtgatactattgctaaggggaaagac
ggtaaaaatggtgagaaaggtgagaaaggtgatggaggggaacaaggctcagcagggcct
agaggcgaagcaggtccagcaggatcaccaggatcacaaggtgcaactggtcctgtaggt
ccaaaaggagatgcaggagtaaaaggcgataggggtgaccgtggtgaagcaggagcagtg
ggccctcaagatcctgcgggtccagcaggggctaagggtgacaaaagtgatacgggccct
gcgggtccagtagggcctgggggtgaaccaggtcctaaaggtgaacaagggattccaggg
gtagcaggtcctaagggcgatagaggcgaagctggcccaatgggaccacaaggaccgcag
ggaacagcgggtgctcaggaacctaagggggataaaggcgatccaggacaagcgggtcca
gcaggaccacaaggccctgcgagtccaacgggatcacaaggacctgcgggtccaacggga
tcacaagggcctgcgggtccaacgggatcacaaggacctgcgggtccaacgggtccagca
ggaccacaaggccctacgggtccaacgggacctgctggtccaaaaggagaaaatgtgggc
cgtggtttaggtttgaaagatgatgctgaatcaaataaaacggcacttacccctacagat
gcacaaaaagctattgctggtgataacaaagacggtaaaggcggcttattggctcaaacg
ggtaatgcgttaaataatgtagcgacagtgaaagatttacaagccattgcacaagcgggc
ttagacttgacgggtaacaacgccgataccactgtacatcgtccattgggtacgaagtta
accgttgagggtgaaggcaaatggaatggtaaggactcagcggctaataacctttatgtg
gaagcgcaagtggcagataacaaacttgttgtgaaaatgaacagggatttaacgaactta
aattctgtgactttaggcactgcgacaatgactggtgataagaatacaatcaaccttact
ggtgcaggagagaaagtcgaggaagagtttgttaaatgggacccagtgactaaacaacct
attcttgatgagaatggcaatctccagaaatataaagagaaagttgatcctcgtgtgaaa
ctgagtggtattgctgatggtgatatttcaccaaatagtactgatgcagtgaatggtcgc
caagtttatgttttaacctatggtatgaagttcttccacaccaatgatggtcataatgca
gaggagcaaattaaccataagtcgaatacagtggattcaagagcttcaggttcatactct
actgcagttggttacaaagctcacgcgaaaggggagagttctgttgctttaggtaacggg
gctacagctggagagcaaggcgtggctattggtcacggtgctgtggcgtcaggtaaacaa
tctatttcgattggtaccggcaatgtggtgagtggtaataactcaggtgctattggtgac
cctaatacaattaaagcagatcgctcttatgcattaggtaataataaccaagtgaatgca
ggtcaatctgatgtgtttgttgtcggtaacaacgtgaaaaacacaaccagcaactcggta
ttcttgggaacaaactcaggctatgtggcagcaggtgcaaccactgcgggagcgggtgct
ttagaaagccaagtaataggtggtgtgtataacgcttatgccggcggtaaagcaactgaa
gttgtaggcgtggtgagcgtgggtaatgtagacagtaatggcaaaatggaaactcgccgt
attcaaaacgttgcacctggtttaatctctgagcaaagtaccgatgcgattaatggtagc
cagttgtatagcttaatatctcagcacaaggtgcatatgggcgatattcacaataagatc
aaccgtaataataaagctctgcgtgcgggtattgcaggttctaacgccgcagcaggttta
ccacaggtttatctccctggtaaatcaatggttgcggcatcagcggggactttcaaaggt
caatctgcattggctgtgggttactcaagagcatcagataacggcaagctgatccttaaa
ttacaaggtaatgcaaatactagtggtgaaatgggcggctctgtgggggtaggttatcag
tggtag
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