KEGG   Helicobacter pylori PeCan4: HPPC_03495Help
Entry
HPPC_03495        CDS       T01322                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
hpc  Helicobacter pylori PeCan4
Pathway
hpc00970  Aminoacyl-tRNA biosynthesis
hpc01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hpc00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HPPC_03495 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hpc03029]
    HPPC_03495 (gatB)
Enzymes [BR:hpc01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     HPPC_03495 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     HPPC_03495 (gatB)
Mitochondrial biogenesis [BR:hpc03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    HPPC_03495 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey VAPB_antitox HcyBio
Motif
Other DBs
NCBI-ProteinID: ADO06929
UniProt: E1Q6I6
LinkDB All DBs
Position
complement(703882..705306)
Genome map
AA seq 474 aa AA seqDB search
MPFEAVIGLEVHVQLNTKTKIFCSCSTSFGESPNSNTCPVCLGLPGALPVLNKEVVKKAI
QLGTAIEANINQYSIFARKNYFYPDLPKAYQISQFEVPIVSDGKLEIDTKEGAKIVRIER
AHMEEDAGKNIHEGSCSLVDLNRACTPLLEIVSKPDMRNSEEAIAYLKKLHAIVRFIGIS
DANMQEGNFRCDANVSIRPKGDEKLYTRVEIKNLNSFRFIAKAIEYEIERQSAAWESGRY
HKEVVQETRLFDTHKGITLSMRNKEESADYRYFKDPDLYPVFIDEKLLKEAQKINELPSA
KKIRYMKDFSIKEDDANLLVSDPLLAEYFESMLNLGVKAKTSVTWLCVELLGRLKAEITL
ENCGVSAHMLGTLAKRIDEGKISGKSAKDVLDRLLEEQGGDVDALIEQMGLSQVNDTEAI
VKVIEEALKNNADKVLEYKSGKDKLFGFFVGQAMKNLKGANPSVVNAILKEKLD
NT seq 1425 nt NT seq  +upstreamnt  +downstreamnt
atgccatttgaagctgtaatagggctagaagtccatgtccaactcaacaccaaaaccaaa
atcttttgctcttgctctacaagctttggagaatcccctaattctaacacttgccctgtg
tgtttgggcttaccgggagctttgccggtattgaataaagaagtggttaaaaaagccatc
caattaggcacagccattgaagctaacatcaaccaatattccatttttgcgaggaaaaat
tatttttaccctgatttgcctaaggcttatcaaatttcgcagtttgaagtccctattgtg
agcgatgggaaattagagattgacactaaagagggcgcaaaaatcgtgcgtattgaaaga
gcccacatggaagaagacgccggtaaaaatatccatgagggcagctgttctttagtggat
ttgaaccgcgcttgcacccctttattagaaattgtcagtaagccggacatgcgaaatagt
gaagaagccatagcgtatttgaaaaagctccatgctatcgtgcgttttatagggatttct
gatgcgaacatgcaagaggggaatttcaggtgcgatgcgaatgtatccattagacccaaa
ggcgatgaaaagctttacacgagggtggagattaaaaacttaaatagctttagattcatc
gctaaagcgattgaatacgagatagagcgccaaagcgcggcgtgggaaagcgggcgttat
cataaagaagtggttcaagaaacgcgcctttttgacacccataaagggatcactctttct
atgcgcaataaagaagaatcagcggattaccgctattttaaagatccggatttgtatcct
gtttttattgatgaaaaacttttaaaagaagctcaaaagatcaatgaattgcctagcgcg
aaaaaaatccgctacatgaaagattttagcattaaagaagacgatgcgaatttattagtg
agcgatcctttattggcagaatattttgaaagcatgctcaatcttggggttaaggctaaa
acgagcgtaacatggctttgcgtggaattattagggcgtttgaaagccgaaatcacttta
gaaaattgcggagttagcgctcacatgttaggcactttagccaaacgcattgatgagggc
aagatttctggcaagagcgctaaagatgtgttagacaggcttttagaagagcaagggggc
gatgtggatgcgctcattgaacaaatgggcttatctcaagtcaatgacacagaagcgatt
gttaaagtcatagaagaggcgcttaaaaacaacgctgataaggtacttgaatacaaaagc
ggtaaggacaagctttttggtttttttgtggggcaggcgatgaaaaatttaaaaggcgct
aatcctagcgtggtgaatgctattttgaaagagaaattggattga

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