KEGG   Helicobacter pylori F30: HPF30_0596Help
Entry
HPF30_0596        CDS       T01895                                 

Gene name
ddl
Definition
(GenBank) D-alanyl-alanine synthetase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
hpf  Helicobacter pylori F30
Pathway
hpf00473  D-Alanine metabolism
hpf00550  Peptidoglycan biosynthesis
hpf01100  Metabolic pathways
hpf01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:hpf00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    HPF30_0596 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HPF30_0596 (ddl)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    HPF30_0596 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hpf01011]
    HPF30_0596 (ddl)
Enzymes [BR:hpf01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     HPF30_0596 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:hpf01011]
 Precursor biosynthesis
  Amino acid ligase
   HPF30_0596 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATP-grasp_4 ATPgrasp_TupA RimK GARS_A VitD-bind_III
Motif
Other DBs
NCBI-ProteinID: BAJ56693
UniProt: E6NIU0
LinkDB All DBs
Structure
PDB: 

Position
complement(629014..630057)
Genome map
AA seq 347 aa AA seqDB search
MEFCVLFGGASFEHEISIVSAIALKEVLKDRIKYFIFLDENHHFYLVEESNMHSKYFAQI
KEKKLPPLILTRNGLLKSSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPR
IEASVLSYNKYLTKLYAKDLGVKTLDYVLLNEKNRANALDLIGFNFPFIIKPSNAGSSLG
VSVVKEEKELIYALDGAFEYSKEVLIEPFIQEVKEYNLAGCKIKKDFCFSYIEEPNKQEF
LDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGALIRCDFFVIENEVYLNE
INPIPGSLANYLFDDFKTTLENLAQSLPKTPKIPIKNSYLLQIQKNK
NT seq 1044 nt NT seq  +upstreamnt  +downstreamnt
gtggaattttgcgttttatttggtggggcgagttttgagcatgaaatcagcattgtgagc
gcgatcgcgcttaaagaagtgctaaaggataggattaaatattttatttttttagatgag
aaccatcatttttatttggttgaagaatccaacatgcattcaaaatacttcgctcaaatc
aaagaaaaaaaattaccccccctaatccttacacgcaatggtttgcttaagagctcgttt
ttaggcgctaagattatagaattgcctttagtgatcaatcttgtgcatgggggcgatggc
gaagatgggaaattagcgagcttgttagaattttatcgtatcgcttttataggtcctagg
attgaagcgagcgtgttgagttataacaaatatttaaccaagctttacgccaaagactta
ggggtaaagactttagattatgttcttttgaatgaaaaaaatcgcgctaacgctctagat
ttgattggctttaattttcctttcatcatcaagcccagtaacgccgggagctctttaggg
gtgagcgttgtgaaagaagaaaaagaattgatttacgctttagacggcgcgtttgaatat
tctaaagaggtcttaatagagcctttcattcaggaagtgaaagaatacaatttagccggc
tgcaagatcaaaaaggatttttgtttttcttatattgaagagcctaacaaacaggaattt
ttagatttcaaacaaaaatatttggatttttcacgcaataaagcccctaaagcgaatctt
tctaacgccctagaagagcaattgaaagaaaattttaaaaaactctataacgatttgttt
gatggcgcgcttattcgttgcgatttttttgtcatagaaaatgaagtgtatcttaatgag
atcaaccccattcctggcagtttggccaattatttgtttgatgattttaaaacaacgcta
gaaaatttagcgcaatcattacccaaaacccctaaaatcccaatcaaaaactcttatttg
ttgcaaatccaaaagaataagtaa

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