Helicobacter pylori 908: hp908_0271
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Entry
hp908_0271 CDS
T01893
Symbol
xseA1
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hpi
Helicobacter pylori 908
Pathway
hpi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
hp908_0271 (xseA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpi03400
]
hp908_0271 (xseA1)
Enzymes [BR:
hpi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
hp908_0271 (xseA1)
DNA repair and recombination proteins [BR:
hpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
hp908_0271 (xseA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF6645
SSB
Motif
Other DBs
NCBI-ProteinID:
ADN79401
LinkDB
All DBs
Position
259002..260264
Genome browser
AA seq
420 aa
AA seq
DB search
MHVLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKG
NANRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKG
YFDEANKLPKPNFPKRVAVITSQNSAAWADMQKIASKRWPMCELVCINTLMQGEGCVQSV
VESIAYADSFHDTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD
FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLRHSFKTLLHQKKAHLEHLAA
SLKRLSFENKHHLNALKLEKLTIALENKTLEFLRFKKMLLEKISIQVLTSPFLQTKTEHL
NRLENALKLAYANLKLPQFGAFVSKNDQAIGLEALKMGDKIELNNEKARASAEILSVDRV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtattgagcgtgagcgaaatcaacgcgcaaatcaaagcccttttagaagcgact
tttttgcaagttagggttcaaggggaagtgagtaatttgactatccacaaagtgagcggc
catgcgtatttttcgctcaaagacagccaatcagtcatcaaatgcgtgctgtttaaaggg
aacgctaacaggctcaaattcgctttaaaagaagggcaggaagtggttgtttttgggggt
attagcgtgtatgtcccaaggggggattatcaaatcaattgctttgaaatagagcctaaa
gatataggttcattaactttagctttagagcaattgaaagaaaaattacgccttaaaggc
tattttgatgaagcgaataaattgcccaaaccaaactttcctaaacgagtggcagtcatc
acttctcaaaattcagccgcttgggcggacatgcaaaagatcgcttccaaacgatggccg
atgtgtgaattagtctgcatcaacactttaatgcagggggaggggtgcgttcaaagcgtg
gtggagagcatcgcttatgcggatagttttcatgacacaaaaaacgcttttgatgcgatt
gtagtggctaggggtggggggagcatggaggatttgtattctttcaatgatgaaaaaatc
gctgatgctctgtatttggctaaaactttcagcatgtcagctattgggcatgagagcgat
tttttattgagcgatttagtagcggatttaagggcttctacgccttcaaacgcgatggag
atcttactccctaatagcgatgaatggttgcaaagacttgatgggtttaatgtgaaattg
cgccactcttttaaaactttgctccatcaaaaaaaggcgcatttagagcatttagcggct
tctttgaaacgattgagttttgaaaacaagcaccatttaaacgctttaaaattagagaaa
ttaacaatcgctttagaaaataaaaccttagaatttttacgctttaaaaaaatgctttta
gaaaaaatctctattcaagtattgacaagcccttttttacaaaccaaaacagagcactta
aacaggctagaaaacgccctcaaactcgcttacgcaaatttgaaattgccccaattcggg
gcgtttgtgagcaagaacgatcaagcgataggattagaggcattaaaaatgggcgataaa
attgaattaaacaatgaaaaagccagagcgagcgctgaaattttgagcgtggatagggtg
tag
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