KEGG   Helicobacter pylori 908: hp908_1231
Entry
hp908_1231        CDS       T01893                                 
Symbol
holB
Name
(GenBank) DNA poymerase III subunit delta
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
hpi  Helicobacter pylori 908
Pathway
hpi03030  DNA replication
hpi03430  Mismatch repair
hpi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    hp908_1231 (holB)
   03430 Mismatch repair
    hp908_1231 (holB)
   03440 Homologous recombination
    hp908_1231 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpi03032]
    hp908_1231 (holB)
   03400 DNA repair and recombination proteins [BR:hpi03400]
    hp908_1231 (holB)
Enzymes [BR:hpi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     hp908_1231 (holB)
DNA replication proteins [BR:hpi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     hp908_1231 (holB)
DNA repair and recombination proteins [BR:hpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     hp908_1231 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2
Other DBs
NCBI-ProteinID: ADN80354
LinkDB
Position
1205614..1206270
AA seq 218 aa
MKNSNRLIYTDNLEESLEEIASLFEHHIKFYTEILEKDKKVIKTFNKDFKIEHAKEVISK
AHLKHSELNAFLIAAPSYGIEAQNALLKILEEPPNNICFIMFAKSPNHVLATIKSRLIKE
DKRQKIPLKPLDLDLSKLDLKDIYAFLKNLDKENFDSRENQRERIESLLESIHRHKIPLN
EQELQAFDLAIKANSSYYKLSYNLLPLLLSLLSKKKTP
NT seq 657 nt   +upstreamnt  +downstreamnt
gtgaaaaactccaaccgccttatttatacggacaatcttgaagagagcttagaagagatc
gcaagcctttttgaacaccacattaaattctacacggagattcttgaaaaagacaaaaag
gtgatcaaaacttttaacaaggattttaaaattgagcatgctaaagaagtcatttccaag
gctcacctaaaacacagcgaactgaacgcctttttaatcgccgcgcctagttatggcata
gaagcccaaaacgcgctcttaaaaatcttagaagaacccccgaataacatttgttttatc
atgttcgctaaaagcccaaaccatgtgttagccaccattaaatcccgcctaatcaaagaa
gacaagcgccaaaaaatccccctaaaacctttagatttggatttatccaagttggatttg
aaagacatttatgcgtttttgaaaaatttagacaaagaaaattttgattccagagaaaat
cagagggaaaggattgaaagcctgttagagagtatccacaggcataagatccccttaaat
gagcaagaattgcaagcctttgatttagcgatcaaggctaacagctcttattacaagctc
agctataatcttttaccactgcttttaagccttttatccaaaaagaaaacgccatga

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