Vreelandella piezotolerans: GYM47_12965
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Entry
GYM47_12965 CDS
T07036
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hpiz
Vreelandella piezotolerans
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpiz03400
]
GYM47_12965
DNA repair and recombination proteins [BR:
hpiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYM47_12965
Archaeal homologous recombinant proteins
GYM47_12965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QJA24941
UniProt:
A0A6H1Y978
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All DBs
Position
complement(2835525..2836673)
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AA seq
382 aa
AA seq
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MRLLHTADWHLGRLFHNLSLLEDQRHVLQQLLAIIDREQVDAVLVAGDIYDRSVPPAAAV
TLLDEILVELCEKRSLPVIMISGNHDGAERLGFGARHLRQAGLHILTDLATCDQPVTLTM
GGDTLDVFGIPYADPEYVRSAFGVDVRDFDGAHRYLLERIEAQRQPGRPTMLMSHCFVDG
GTASDSERPLTLGGAESVAWEPMQRFDYVALGHLHGPQTRGGEHIRYSGSLLKYSFSEAT
QRKGVTLVEVGSEGVTQIEHHPLLPRRDVRVLEGELTQLLAQGASDPYADDYLLVRLTDR
HAILDPMGKLREVYPNVLHLEKPGMLEAKGRQQLDRERLQFSALDMFSDFFTQASGEPMS
DEQARAMSELITTLSREQEGQA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcgattacttcacaccgccgattggcatttggggcggctattccataacctctccttg
ctggaagaccagcgccatgtgttgcagcagctgctggcgatcatcgaccgcgagcaggtg
gatgccgtgctggtcgcaggcgatatttacgaccgctctgtgccacccgctgcggcggtc
acgctgctggatgagatattggtcgagctgtgcgagaagcgcagcctgccggtcatcatg
atttccggtaaccacgacggtgccgagcgcttgggttttggcgcccgccatttgcgtcag
gccgggctgcatatcctcaccgacctggccacctgcgatcagccggtcacgctaacgatg
ggcggtgacacgttggatgtgttcggcatcccctacgccgatccggagtacgtgcgcagc
gcgtttggcgtggacgtgcgcgacttcgacggcgcccaccgctacctgctggagcgcatc
gaggcgcagcgccagccgggccgcccgacgatgctcatgagccactgctttgtcgatggc
ggcaccgccagcgactccgagcgcccgctcaccctgggcggggcggagagcgtggcttgg
gagcccatgcagcgtttcgactacgtggcgcttggccatcttcacggcccgcaaactcgc
ggtggcgagcacattcgctacagcggctcgctgctgaagtacagcttttccgaagccact
cagcgtaaaggcgtcaccctcgtcgaggtgggcagcgaaggtgtcacccagatcgagcat
catccgctgctaccccgtcgtgacgtacgcgtactggaaggcgagctgacgcagctgctg
gcccaaggcgccagcgatccctacgccgatgactacttgctggtgcgcctcaccgaccgc
catgccattctcgaccccatgggcaaactgcgggaggtctaccccaacgtgctgcacctg
gagaagcccggcatgctggaagcaaaagggcgccagcagctagaccgcgagcggcttcag
ttcagcgcgctggatatgttcagcgactttttcacccaagccagcggtgagccaatgagc
gacgagcaggcccgcgccatgagcgagctgatcaccaccctcagccgtgagcaggagggc
caagcatga
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