KEGG   Helicobacter pylori J99: jhp_1398
Entry
jhp_1398          CDS       T00020                                 
Symbol
ribD
Name
(GenBank) putative RIBOFLAVIN-SPECIFIC DEAMINASE
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
hpj  Helicobacter pylori J99
Pathway
hpj00740  Riboflavin metabolism
hpj01100  Metabolic pathways
hpj01110  Biosynthesis of secondary metabolites
hpj01240  Biosynthesis of cofactors
hpj02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hpj00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    jhp_1398 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    jhp_1398 (ribD)
Enzymes [BR:hpj01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     jhp_1398 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     jhp_1398 (ribD)
SSDB
Motif
Pfam: dCMP_cyt_deam_1 RibD_C
Other DBs
NCBI-ProteinID: AAD06964
UniProt: Q9ZJB5
LinkDB
Position
complement(1529621..1530655)
AA seq 344 aa
MRLYESLLEICLNKAWEYQTLALENPSVACMVLDKNHEILSLETHKKAKTPHAEVLAAKS
ALKILRPHLKSDLEKLEDPKILSDFLKTRHDNAFKDCVFLITLEPCNSYGKTPACSGLLE
ILKPKRVIIATEENEAKKGGLERLQKAHIETIICHNLENKAKNLLLPFRVMEQKGRFNLF
KLALRMNGDYHHGKITGQKSVIFTHNQRAVCDTLIISGKTIRTDNPLLDARFCDSFYHNK
NPNIAILSKRSISPHSKVFFAPNRLVNTFHDPKDLPLEKGFNFIEGGWGLFEGLRDKIDA
LLLHSHASMIGEAFNTLALKTPFKGRLLHAQILENEALLWIENS
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgagactttatgaaagtttattagaaatttgcttgaataaggcgtgggaatatcaaacc
ctagccttagaaaacccaagcgtagcctgcatggtgctagataaaaaccatgagatcttg
agtttagaaacccataaaaaagccaaaaccccgcatgcagaagtcttggctgctaaatcg
gcgttaaagattttacgcccccatttaaaaagcgatttagaaaaattagaagaccctaaa
attttaagcgattttttaaaaacgcgccacgataacgcctttaaagactgcgttttttta
atcaccctagagccatgcaattcttatggcaaaaccccggcgtgcagcggattgttagaa
atcttaaagcctaaaagagtgatcattgccacagaagaaaacgaagccaaaaaagggggt
ttagaaaggctacaaaaagctcacattgaaacaataatttgtcataatttagaaaacaag
gctaaaaatttgctcttgccttttagggtaatggaacaaaaggggcgttttaatttgttc
aaactcgctttaaggatgaatggggattatcatcatggcaagatcactgggcaaaaaagc
gtgattttcacgcacaaccagcgagcggtatgcgacactctcatcatttctgggaaaacc
ataagaacggacaaccccttattagatgctcgcttttgcgatagcttttatcacaataaa
aaccccaatatcgctattttatccaagcgctcaattagcccccattcaaaagtttttttt
gcgcccaatcgtttggttaatacttttcatgaccctaaagatttacccctagagaaaggg
tttaatttcattgaaggggggtggggattgtttgagggtttgagggataaaattgatgcg
ttgcttttgcattcgcatgcgtctatgattggtgaagcgtttaatacgctcgctctaaaa
accccttttaaagggcggttgttgcatgcgcaaatcttagaaaatgaagcccttttatgg
atagaaaactcttaa

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