KEGG   Helicobacter pylori B8: HPB8_623
Entry
HPB8_623          CDS       T01262                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
hpl  Helicobacter pylori B8
Brite
KEGG Orthology (KO) [BR:hpl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpl03016]
    HPB8_623 (truD)
Enzymes [BR:hpl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     HPB8_623 (truD)
Transfer RNA biogenesis [BR:hpl03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HPB8_623 (truD)
 Prokaryotic type
    HPB8_623 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: CBI66180
UniProt: D7FDC3
LinkDB
Position
complement(588614..589759)
AA seq 381 aa
MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
HIFSQILGVKIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTHNLQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTKQVLEQIAQFGMPNYFGSQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNSLLSKRLEISKIISAFSLKENLEFFKQKNLN
INPNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALKLEKESERFLNKEAVPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLSSHAKTLGSRRFFWVFAENVTSQYMKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgagtttagcaac
acgggcgaacatgccgttattcaagtgaggaaaagcggtttaagcactttggaaatgctt
cacattttttctcaaattttaggggtaaaaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgcataatttgcaagaaagaaaccttaaaatcctgtctttgaattaccat
cataataaaatcaaattagggcatttaaaggggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaaaacaaagcaggttttagaacaaatcgcgcagtttggc
atgcctaattattttggctcacaacgctttgggaagttcaatgacaaccaccaagagggt
ttaaaaattttacaaaatcaaacgaaattcgctcatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaattcgcttttaagcaaacgattagaaatcagtaaa
atcattagcgcttttagcctaaaagaaaatttagaatttttcaaacaaaaaaatttaaat
atcaatccaaacaccctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgatgctttaaaattagaaaaa
gaaagcgaaaggtttttaaacaaagaagctgtgcctacggggttactagatggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataacctttta
agtagccatgctaaaacactaggatccaggcggtttttttgggtgtttgcagaaaatgta
acttctcaatacatgaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgctgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga

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