Helicobacter pylori B8: HPB8_623
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Entry
HPB8_623 CDS
T01262
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpl
Helicobacter pylori B8
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpl03016
]
HPB8_623 (truD)
Enzymes [BR:
hpl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPB8_623 (truD)
Transfer RNA biogenesis [BR:
hpl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPB8_623 (truD)
Prokaryotic type
HPB8_623 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CBI66180
UniProt:
D7FDC3
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All DBs
Position
complement(588614..589759)
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AA seq
381 aa
AA seq
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MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
HIFSQILGVKIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTHNLQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTKQVLEQIAQFGMPNYFGSQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNSLLSKRLEISKIISAFSLKENLEFFKQKNLN
INPNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALKLEKESERFLNKEAVPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLSSHAKTLGSRRFFWVFAENVTSQYMKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgagtttagcaac
acgggcgaacatgccgttattcaagtgaggaaaagcggtttaagcactttggaaatgctt
cacattttttctcaaattttaggggtaaaaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgcataatttgcaagaaagaaaccttaaaatcctgtctttgaattaccat
cataataaaatcaaattagggcatttaaaggggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaaaacaaagcaggttttagaacaaatcgcgcagtttggc
atgcctaattattttggctcacaacgctttgggaagttcaatgacaaccaccaagagggt
ttaaaaattttacaaaatcaaacgaaattcgctcatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaattcgcttttaagcaaacgattagaaatcagtaaa
atcattagcgcttttagcctaaaagaaaatttagaatttttcaaacaaaaaaatttaaat
atcaatccaaacaccctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgatgctttaaaattagaaaaa
gaaagcgaaaggtttttaaacaaagaagctgtgcctacggggttactagatggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataacctttta
agtagccatgctaaaacactaggatccaggcggtttttttgggtgtttgcagaaaatgta
acttctcaatacatgaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgctgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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