KEGG   Helicobacter pylori B8: HPB8_945Help
Entry
HPB8_945          CDS       T01262                                 

Gene name
ddlA
Definition
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
hpl  Helicobacter pylori B8
Pathway
hpl00473  D-Alanine metabolism
hpl00550  Peptidoglycan biosynthesis
hpl01100  Metabolic pathways
hpl01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:hpl00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    HPB8_945 (ddlA)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HPB8_945 (ddlA)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    HPB8_945 (ddlA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hpl01011]
    HPB8_945 (ddlA)
Enzymes [BR:hpl01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     HPB8_945 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:hpl01011]
 Precursor biosynthesis
  Amino acid ligase
   HPB8_945 (ddlA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATPgrasp_TupA GARS_A VitD-bind_III RimK
Motif
Other DBs
NCBI-ProteinID: CBI66502
UniProt: D7FE95
LinkDB All DBs
Position
931027..932070
Genome map
AA seq 347 aa AA seqDB search
MEFCVLFGGASFEHEISIVSAIALKEALKDRIKHFIFLDEDHHFYLIEASNMHSKYFAQI
KEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPR
VEASVLSYNKYLTKLYANNLGVKTLGHVLLNEKNRANALDLMNFNFPFIIKPNSAGSSLG
VSVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYVEEPNKQEF
LDFKQKYLDFSRAKSPKANLSSALEEQLKENFKKLYNDLFDGAIIRCDFFVIENKVYLNE
INPIPGSLAHYLFDDFKTTLENLAQSLPKTPKIQVKNSYLLQIQKNK
NT seq 1044 nt NT seq  +upstreamnt  +downstreamnt
gtggagttttgcgttttatttggtggggcgagttttgagcatgaaatcagcattgtgagc
gcgatcgcgcttaaagaagcactaaaggataggattaaacattttatttttttagacgaa
gaccatcacttttatttgattgaagcatctaacatgcattcaaaatacttcgctcaaatc
aaagaaaaaaaattaccccccctaatcctcacacacaatggcttgctcaaaaactcgttt
ttaggcgctaagattatagaattgcctttagtgatcaatctcgtgcatgggggcgatggc
gaagacgggaaattagcgagcttgttagaattttatcgtatcgcttttataggccctagg
gttgaagcgagcgtgttgagttataacaaatatttaaccaagctttatgccaacaattta
ggggtaaagactttaggtcatgttcttttgaatgaaaaaaaccgcgctaacgccttggat
ttgatgaactttaatttccctttcataatcaagcctaatagcgccgggagctctttagga
gtgagcgttgtgaaggaagaaaaagaattgatttacgctttagatagcgcgtttgaatat
tctaaagaagttttaatagagcctttcattcagggcgtgaaagaatacaatttagccggt
tgcaagatcaaaaaggatttttgtttttcttatgtggaagagcctaacaaacaggaattt
ttagatttcaaacaaaaatatttggatttttcacgcgccaaatcccctaaagcgaatctt
tctagcgccctagaagaacaattgaaagaaaattttaaaaaactctataacgatttgttt
gatggtgcgatcattcgttgcgatttttttgtcatagaaaataaagtgtatcttaatgag
atcaaccccattcctggcagtttggcccattatttgtttgatgattttaaaacaacgcta
gaaaatttagcgcaatcattacccaaaacccctaaaatccaagttaaaaactcttatttg
ttgcaaatccaaaagaataagtaa

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